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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170524226
CEWH01001078
195303
Gammaproteobacteria
GAT
Ile
>WENV170524237
CEWH01002123
313881
Gammaproteobacteria
GGC
Ala
>WENV170524389
CEWH01014576
173040
Gammaproteobacteria
GAC
Val
>WENV170524418
CEWH01017187
240642
Gammaproteobacteria
GTT
Asn
>WENV170524688
CEWH01038878
17426
Gammaproteobacteria
GCT
Ser
>WENV170524698
CEWH01039601
313881
Gammaproteobacteria
GGC
Ala
>WENV170524745
CEWH01045629
61925
Gammaproteobacteria
TAA
Leu
>WENV170524812
CEWH01051077
282537
Gammaproteobacteria
TTC
Glu
>WENV170525013
CEWH01071676
247088
Gammaproteobacteria
CCA
Trp
>WENV170525335
CEWH01111445
245602
Gammaproteobacteria
TTT
Lys
>WENV170525403
CEWH01121437
313881
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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