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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170526764
CEWI01069294
147048
Gammaproteobacteria
CCA
Trp
>WENV170527669
CEWI01249317
149035
Gammaproteobacteria
CCG
Arg
>WENV170527377
CEWI01140310
236013
Gammaproteobacteria
TGC
Ala
>WENV170527257
CEWI01132144
160030
Gammaproteobacteria
GGG
Pro
>WENV170526190
CEWI01011862
185163
Gammaproteobacteria
ACG
Arg
>WENV170526280
CEWI01020191
149036
Gammaproteobacteria
CCA
Trp
>WENV170527207
CEWI01126700
149036
Gammaproteobacteria
CCA
Trp
>WENV170527676
CEWI01250693
149073
Gammaproteobacteria
CAT
Met
>WENV170526850
CEWI01080440
412799
Gammaproteobacteria
GCA
Cys
>WENV170526721
CEWI01062836
340801
Gammaproteobacteria
CCT
Arg
>WENV170526832
CEWI01077334
8480
Gammaproteobacteria
GCT
Ser
>WENV170526272
CEWI01019829
152301
Gammaproteobacteria
GAT
Ile
>WENV170526245
CEWI01017262
237412
Gammaproteobacteria
TAC
Val
>WENV170527511
CEWI01195450
96103
Gammaproteobacteria
CAA
Leu
>WENV170526804
CEWI01074650
237714
Gammaproteobacteria
TAC
Val
>WENV170526622
CEWI01051876
173040
Gammaproteobacteria
GAC
Val
>WENV170526929
CEWI01088799
151889
Gammaproteobacteria
CAT
Met
>WENV170527076
CEWI01108231
149037
Gammaproteobacteria
GAC
Val
>WENV170526696
CEWI01059447
45411
Gammaproteobacteria
GGA
Ser
>WENV170526831
CEWI01077334
16460
Gammaproteobacteria
TGA
Ser
>WENV170526341
CEWI01024157
147117
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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