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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170529198
CEWJ01112645
351461
Alphaproteobacteria
TTG
Gln
>WENV170529483
CEWJ01135652
99726
Alphaproteobacteria
TAG
Leu
>WENV170527889
CEWJ01006655
10665
Alphaproteobacteria
GCT
Ser
>WENV170529493
CEWJ01136836
193550
Alphaproteobacteria
TCT
Arg
>WENV170529358
CEWJ01127043
113700
Alphaproteobacteria
>WENV170529197
CEWJ01112645
199776
Alphaproteobacteria
CGG
Pro
>WENV170529057
CEWJ01098744
338282
Alphaproteobacteria
GTT
Asn
>WENV170529122
CEWJ01103988
200119
Alphaproteobacteria
CAT
Met
>WENV170529706
CEWJ01143646
339846
Alphaproteobacteria
GAC
Val
>WENV170529801
CEWJ01147186
157999
Alphaproteobacteria
TCT
Arg
>WENV170527849
CEWJ01003722
276379
Alphaproteobacteria
TGC
Ala
>WENV170528710
CEWJ01066287
319095
Alphaproteobacteria
TAC
Val
>WENV170528738
CEWJ01068652
151730
Alphaproteobacteria
CCG
Arg
>WENV170529453
CEWJ01133491
341164
Alphaproteobacteria
GCC
Gly
>WENV170529262
CEWJ01119019
75256
Alphaproteobacteria
CAG
Leu
>WENV170528933
CEWJ01087310
59164
Alphaproteobacteria
GAG
Leu
>WENV170529676
CEWJ01143019
352191
Alphaproteobacteria
GGT
Thr
>WENV170528427
CEWJ01042385
266073
Alphaproteobacteria
TTT
Lys
>WENV170528266
CEWJ01030721
369678
Alphaproteobacteria
GGT
Thr
>WENV170528525
CEWJ01051592
114040
Alphaproteobacteria
CAA
Leu
>WENV170528724
CEWJ01067526
316120
Alphaproteobacteria
TGC
Ala
>WENV170529951
CEWJ01227094
191695
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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