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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170532297
CEWO01032528
365250
Alphaproteobacteria
GCC
Gly
>WENV170532635
CEWO01055842
306070
Alphaproteobacteria
CCA
Trp
>WENV170532104
CEWO01019514
241021
Alphaproteobacteria
GGC
Ala
>WENV170532573
CEWO01051311
113700
Alphaproteobacteria
>WENV170533479
CEWO01133737
23468
Alphaproteobacteria
GCT
Ser
>WENV170533241
CEWO01110889
338282
Alphaproteobacteria
GTT
Asn
>WENV170534799
CEWO01375422
147879
Alphaproteobacteria
TGG
Pro
>WENV170532365
CEWO01035749
147877
Alphaproteobacteria
GTG
His
>WENV170534000
CEWO01180644
147877
Alphaproteobacteria
GTG
His
>WENV170532795
CEWO01070052
359842
Alphaproteobacteria
GAC
Val
>WENV170532326
CEWO01033879
412477
Alphaproteobacteria
GCA
Cys
>WENV170532113
CEWO01020088
412424
Alphaproteobacteria
TCC
Gly
>WENV170533949
CEWO01177591
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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