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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550702
CXWF01015287
183605
Gammaproteobacteria
CCG
Arg
>WENV170551070
CXWF01094879
313881
Gammaproteobacteria
GGC
Ala
>WENV170550727
CXWF01017756
58822
Gammaproteobacteria
CAA
Leu
>WENV170550794
CXWF01028217
17426
Gammaproteobacteria
GCT
Ser
>WENV170550816
CXWF01032827
45109
Gammaproteobacteria
GGA
Ser
>WENV170550918
CXWF01049293
147114
Gammaproteobacteria
CCT
Arg
>WENV170550810
CXWF01031273
145196
Gammaproteobacteria
CAT
Met
>WENV170550863
CXWF01040766
145196
Gammaproteobacteria
CAT
Met
>WENV170550580
CXWF01002070
59172
Gammaproteobacteria
CAA
Leu
>WENV170550993
CXWF01062694
198730
Gammaproteobacteria
GAC
Val
>WENV170550664
CXWF01010887
145366
Gammaproteobacteria
ACG
Arg
>WENV170550880
CXWF01043997
294663
Gammaproteobacteria
TTC
Glu
>WENV170550997
CXWF01063212
147111
Gammaproteobacteria
CCG
Arg
>WENV170550584
CXWF01002440
268812
Gammaproteobacteria
GTT
Asn
>WENV170550798
CXWF01028627
162437
Gammaproteobacteria
TCT
Arg
>WENV170550741
CXWF01020614
147118
Gammaproteobacteria
GAC
Val
>WENV170550978
CXWF01060064
319098
Gammaproteobacteria
TAC
Val
>WENV170550796
CXWF01028292
16396
Gammaproteobacteria
TGA
Ser
>WENV170550772
CXWF01024741
241136
Gammaproteobacteria
TTG
Gln
>WENV170550924
CXWF01050587
235886
Gammaproteobacteria
TTC
Glu
>WENV170550588
CXWF01003132
146807
Gammaproteobacteria
TCT
Arg
>WENV170550891
CXWF01045213
243921
Gammaproteobacteria
TTT
Lys
>WENV170550790
CXWF01027177
147120
Gammaproteobacteria
CGG
Pro
>WENV170550624
CXWF01005432
411735
Gammaproteobacteria
GCA
Cys
>WENV170550843
CXWF01036336
411735
Gammaproteobacteria
GCA
Cys
>WENV170550626
CXWF01005923
147117
Gammaproteobacteria
GTC
Asp
>WENV170550627
CXWF01005923
147117
Gammaproteobacteria
GTC
Asp
>WENV170550629
CXWF01005923
147117
Gammaproteobacteria
GTC
Asp
>WENV170550959
CXWF01056412
147112
Gammaproteobacteria
GGG
Pro
>WENV170551015
CXWF01067631
277196
Gammaproteobacteria
GAA
Phe
>WENV170550987
CXWF01062545
150183
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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