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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV004121
DQ366723
366531
Cyanobacteriota
TTG
Gln
>ENV004132
DQ366741
366531
Cyanobacteriota
TTG
Gln
>ENV004137
DQ366745
366531
Cyanobacteriota
TTG
Gln
>ENV004122
DQ366727
306125
Cyanobacteriota
GTG
His
>ENV004134
DQ366742
37357
Cyanobacteriota
TAA
Leu
>ENV005117
EF513300
310428
Cyanobacteriota
TGC
Ala
>ENV005442
EU233393
310428
Cyanobacteriota
TGC
Ala
>ENV004127
DQ366733
23971
Cyanobacteriota
TGA
Ser
>ENV004128
DQ366733
23971
Cyanobacteriota
TGA
Ser
>ENV004135
DQ366744
240100
Cyanobacteriota
CAT
Met
>ENV003715
DQ009422
158847
Cyanobacteriota
GAT
Ile
>ENV003853
DQ020203
158847
Cyanobacteriota
GAT
Ile
>ENV003856
DQ020205
158847
Cyanobacteriota
GAT
Ile
>ENV000721
AJ879826
301510
Cyanobacteriota
TGC
Ala
>ENV001366
AY827754
301510
Cyanobacteriota
TGC
Ala
>ENV001367
AY827757
301510
Cyanobacteriota
TGC
Ala
>ENV001371
AY827770
301510
Cyanobacteriota
TGC
Ala
>ENV001373
AY827780
301510
Cyanobacteriota
TGC
Ala
>ENV003952
DQ181748
301510
Cyanobacteriota
TGC
Ala
>ENV004939
EF368183
301510
Cyanobacteriota
TGC
Ala
>ENV004941
EF368184
301510
Cyanobacteriota
TGC
Ala
>ENV004943
EF368185
301510
Cyanobacteriota
TGC
Ala
>ENV005281
EU032366
301510
Cyanobacteriota
TGC
Ala
>ENV005284
EU032369
301510
Cyanobacteriota
TGC
Ala
>ENV005288
EU032373
301510
Cyanobacteriota
TGC
Ala
>ENV005294
EU032377
301510
Cyanobacteriota
TGC
Ala
>ENV005296
EU032384
301510
Cyanobacteriota
TGC
Ala
>ENV005444
EU233398
301510
Cyanobacteriota
TGC
Ala
>ENV005453
EU233409
301510
Cyanobacteriota
TGC
Ala
>ENV005455
EU233411
301510
Cyanobacteriota
TGC
Ala
>ENV000539
AF547626
275577
Cyanobacteriota
TGC
Ala
>ENV000547
AF547630
275577
Cyanobacteriota
TGC
Ala
>ENV000551
AF547632
275577
Cyanobacteriota
TGC
Ala
>ENV000553
AF547633
275577
Cyanobacteriota
TGC
Ala
>ENV003954
DQ181751
275577
Cyanobacteriota
TGC
Ala
>ENV003957
DQ181753
275577
Cyanobacteriota
TGC
Ala
>ENV003965
DQ181757
275577
Cyanobacteriota
TGC
Ala
>ENV004120
DQ366723
188100
Cyanobacteriota
CCG
Arg
>ENV004138
DQ366745
188100
Cyanobacteriota
CCG
Arg
>ENV004103
DQ366711
341034
Cyanobacteriota
GGT
Thr
>ENV004110
DQ366715
341034
Cyanobacteriota
GGT
Thr
>ENV004111
DQ366715
341034
Cyanobacteriota
GGT
Thr
>ENV000543
AF547628
242587
Cyanobacteriota
TGC
Ala
>ENV000549
AF547631
242587
Cyanobacteriota
TGC
Ala
>ENV000555
AF547634
242587
Cyanobacteriota
TGC
Ala
>ENV000559
AF547636
242587
Cyanobacteriota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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