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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
99 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV000316
AF268429
168586
Gammaproteobacteria
GAT
Ile
>ENV002472
AY934128
306171
Gammaproteobacteria
TGC
Ala
>ENV002893
AY934354
306171
Gammaproteobacteria
TGC
Ala
>ENV003800
DQ009471
306171
Gammaproteobacteria
TGC
Ala
>ENV000035
AB222623
282537
Gammaproteobacteria
TTC
Glu
>ENV000722
AJ879933
236013
Gammaproteobacteria
TGC
Ala
>ENV000955
AY235676
236013
Gammaproteobacteria
TGC
Ala
>ENV000957
AY235677
236013
Gammaproteobacteria
TGC
Ala
>ENV000959
AY235678
236013
Gammaproteobacteria
TGC
Ala
>ENV000961
AY235679
236013
Gammaproteobacteria
TGC
Ala
>ENV000963
AY235680
236013
Gammaproteobacteria
TGC
Ala
>ENV002492
AY934138
236013
Gammaproteobacteria
TGC
Ala
>ENV002837
AY934323
236013
Gammaproteobacteria
TGC
Ala
>ENV003795
DQ009467
236013
Gammaproteobacteria
TGC
Ala
>ENV002839
AY934325
189955
Gammaproteobacteria
GAT
Ile
>ENV004283
DQ834350
254914
Gammaproteobacteria
TGC
Ala
>ENV004286
DQ834353
254914
Gammaproteobacteria
TGC
Ala
>ENV002874
AY934344
152301
Gammaproteobacteria
GAT
Ile
>ENV002346
AY934048
152301
Gammaproteobacteria
GAT
Ile
>ENV002703
AY934249
152301
Gammaproteobacteria
GAT
Ile
>ENV002705
AY934250
152301
Gammaproteobacteria
GAT
Ile
>ENV002751
AY934274
152301
Gammaproteobacteria
GAT
Ile
>ENV002763
AY934280
152301
Gammaproteobacteria
GAT
Ile
>ENV002792
AY934299
152301
Gammaproteobacteria
GAT
Ile
>ENV001456
AY933346
294663
Gammaproteobacteria
TTC
Glu
>ENV002493
AY934139
236029
Gammaproteobacteria
TGC
Ala
>ENV002522
AY934155
236029
Gammaproteobacteria
TGC
Ala
>ENV002894
AY934355
148440
Gammaproteobacteria
>ENV002964
AY934396
148440
Gammaproteobacteria
>ENV002979
AY934404
148440
Gammaproteobacteria
>ENV002521
AY934155
158081
Gammaproteobacteria
GAT
Ile
>ENV002554
AY934173
193275
Gammaproteobacteria
GAT
Ile
>ENV002580
AY934187
193275
Gammaproteobacteria
GAT
Ile
>ENV002947
AY934385
193275
Gammaproteobacteria
GAT
Ile
>ENV002448
AY934107
250885
Gammaproteobacteria
TGC
Ala
>ENV002449
AY934108
250885
Gammaproteobacteria
TGC
Ala
>ENV003232
DQ009154
250885
Gammaproteobacteria
TGC
Ala
>ENV003233
DQ009155
250885
Gammaproteobacteria
TGC
Ala
>ENV003234
DQ009156
250885
Gammaproteobacteria
TGC
Ala
>ENV002835
AY934322
144995
Gammaproteobacteria
GAT
Ile
>ENV002582
AY934188
195303
Gammaproteobacteria
GAT
Ile
>ENV002584
AY934189
195303
Gammaproteobacteria
GAT
Ile
>ENV002588
AY934191
195303
Gammaproteobacteria
GAT
Ile
>ENV002590
AY934192
195303
Gammaproteobacteria
GAT
Ile
>ENV002592
AY934193
195303
Gammaproteobacteria
GAT
Ile
>ENV002594
AY934194
195303
Gammaproteobacteria
GAT
Ile
>ENV002596
AY934195
195303
Gammaproteobacteria
GAT
Ile
>ENV002598
AY934196
195303
Gammaproteobacteria
GAT
Ile
>ENV002600
AY934197
195303
Gammaproteobacteria
GAT
Ile
>ENV002602
AY934198
195303
Gammaproteobacteria
GAT
Ile
>ENV002604
AY934199
195303
Gammaproteobacteria
GAT
Ile
>ENV002606
AY934200
195303
Gammaproteobacteria
GAT
Ile
>ENV002685
AY934240
195303
Gammaproteobacteria
GAT
Ile
>ENV002687
AY934241
195303
Gammaproteobacteria
GAT
Ile
>ENV002689
AY934242
195303
Gammaproteobacteria
GAT
Ile
>ENV002691
AY934243
195303
Gammaproteobacteria
GAT
Ile
>ENV002729
AY934263
195303
Gammaproteobacteria
GAT
Ile
>ENV002733
AY934265
195303
Gammaproteobacteria
GAT
Ile
>ENV002737
AY934267
195303
Gammaproteobacteria
GAT
Ile
>ENV002743
AY934270
195303
Gammaproteobacteria
GAT
Ile
>ENV002747
AY934272
195303
Gammaproteobacteria
GAT
Ile
>ENV002753
AY934275
195303
Gammaproteobacteria
GAT
Ile
>ENV002755
AY934276
195303
Gammaproteobacteria
GAT
Ile
>ENV002757
AY934277
195303
Gammaproteobacteria
GAT
Ile
>ENV002759
AY934278
195303
Gammaproteobacteria
GAT
Ile
>ENV002775
AY934288
195303
Gammaproteobacteria
GAT
Ile
>ENV002781
AY934293
195303
Gammaproteobacteria
GAT
Ile
>ENV002783
AY934294
195303
Gammaproteobacteria
GAT
Ile
>ENV002785
AY934295
195303
Gammaproteobacteria
GAT
Ile
>ENV002787
AY934296
195303
Gammaproteobacteria
GAT
Ile
>ENV002794
AY934300
195303
Gammaproteobacteria
GAT
Ile
>ENV002796
AY934301
195303
Gammaproteobacteria
GAT
Ile
>ENV002798
AY934302
195303
Gammaproteobacteria
GAT
Ile
>ENV002817
AY934312
195303
Gammaproteobacteria
GAT
Ile
>ENV002819
AY934313
195303
Gammaproteobacteria
GAT
Ile
>ENV002829
AY934319
195303
Gammaproteobacteria
GAT
Ile
>ENV002831
AY934320
195303
Gammaproteobacteria
GAT
Ile
>ENV002833
AY934321
195303
Gammaproteobacteria
GAT
Ile
>ENV002849
AY934330
195303
Gammaproteobacteria
GAT
Ile
>ENV002856
AY934334
195303
Gammaproteobacteria
GAT
Ile
>ENV002861
AY934337
195303
Gammaproteobacteria
GAT
Ile
>ENV002863
AY934338
195303
Gammaproteobacteria
GAT
Ile
>ENV002867
AY934340
195303
Gammaproteobacteria
GAT
Ile
>ENV002869
AY934341
195303
Gammaproteobacteria
GAT
Ile
>ENV002881
AY934348
195303
Gammaproteobacteria
GAT
Ile
>ENV002907
AY934365
195303
Gammaproteobacteria
GAT
Ile
>ENV002925
AY934374
195303
Gammaproteobacteria
GAT
Ile
>ENV002927
AY934375
195303
Gammaproteobacteria
GAT
Ile
>ENV002933
AY934378
195303
Gammaproteobacteria
GAT
Ile
>ENV002971
AY934400
195303
Gammaproteobacteria
GAT
Ile
>ENV001307
AY627375
195303
Gammaproteobacteria
GAT
Ile
>ENV002919
AY934371
196013
Gammaproteobacteria
GAT
Ile
>ENV002945
AY934384
147050
Gammaproteobacteria
GAT
Ile
>ENV002965
AY934397
147050
Gammaproteobacteria
GAT
Ile
>ENV002973
AY934401
147050
Gammaproteobacteria
GAT
Ile
>ENV002975
AY934402
147050
Gammaproteobacteria
GAT
Ile
>ENV003011
AY934421
147050
Gammaproteobacteria
GAT
Ile
>ENV003012
AY934422
147050
Gammaproteobacteria
GAT
Ile
>ENV001310
AY627376
285649
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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