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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV004148
DQ397552
128889
Nitrososphaerota
GAT
Ile
>ENV004163
DQ397571
128889
Nitrososphaerota
GAT
Ile
>ENV004214
DQ397837
128889
Nitrososphaerota
GAT
Ile
>ENV004151
DQ397558
163655
Nitrososphaerota
GAA
Phe
>ENV004196
DQ397629
163655
Nitrososphaerota
GAA
Phe
>ENV004238
DQ397863
163655
Nitrososphaerota
GAA
Phe
>ENV004176
DQ397587
133273
Nitrososphaerota
TAC
Val
>ENV004207
DQ397828
133273
Nitrososphaerota
TAC
Val
>ENV004220
DQ397844
133273
Nitrososphaerota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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