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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180001183
FLNX01000180
141635
Bacteroidota
TAC
Val
>WENV180001184
FLNX01000180
141635
Bacteroidota
TAC
Val
>WENV180001302
FLNX01001316
141635
Bacteroidota
TAC
Val
>WENV180001443
FLNX01001829
141635
Bacteroidota
TAC
Val
>WENV180001444
FLNX01001829
141635
Bacteroidota
TAC
Val
>WENV180001193
FLNX01000254
339412
Bacteroidota
GGT
Thr
>WENV180001437
FLNX01001816
339412
Bacteroidota
GGT
Thr
>WENV180001578
FLNX01002703
339412
Bacteroidota
GGT
Thr
>WENV180001790
FLNX01003175
339412
Bacteroidota
GGT
Thr
>WENV180001210
FLNX01000412
237796
Bacteroidota
CGT
Thr
>WENV180001440
FLNX01001820
237796
Bacteroidota
CGT
Thr
>WENV180001952
FLNX01004060
153993
Bacteroidota
GAT
Ile
>WENV180001182
FLNX01000173
394247
Bacteroidota
CTC
Glu
>WENV180001418
FLNX01001790
394247
Bacteroidota
CTC
Glu
>WENV180001594
FLNX01002717
136244
Bacteroidota
TAC
Val
>WENV180001595
FLNX01002717
136244
Bacteroidota
TAC
Val
>WENV180001398
FLNX01001716
237247
Bacteroidota
TTT
Lys
>WENV180001432
FLNX01001806
155123
Bacteroidota
GTT
Asn
>WENV180001571
FLNX01002609
155123
Bacteroidota
GTT
Asn
>WENV180001598
FLNX01002722
155123
Bacteroidota
GTT
Asn
>WENV180001792
FLNX01003176
155123
Bacteroidota
GTT
Asn
>WENV180002011
FLNX01004398
155123
Bacteroidota
GTT
Asn
>WENV180001097
FLNX01000006
145504
Bacteroidota
TGT
Thr
>WENV180001917
FLNX01003817
145504
Bacteroidota
TGT
Thr
>WENV180001370
FLNX01001661
146800
Bacteroidota
>WENV180001867
FLNX01003614
146800
Bacteroidota
>WENV180001553
FLNX01002416
144688
Bacteroidota
CAT
Met
>WENV180002010
FLNX01004396
193809
Bacteroidota
CAT
Met
>WENV180001558
FLNX01002467
301449
Bacteroidota
CGG
Pro
>WENV180001569
FLNX01002588
136207
Bacteroidota
TAC
Val
>WENV180001772
FLNX01003119
344769
Bacteroidota
CTC
Glu
>WENV180001246
FLNX01000818
147148
Bacteroidota
CAT
Met
>WENV180001774
FLNX01003124
415558
Bacteroidota
TTG
Gln
>WENV180002004
FLNX01004384
415558
Bacteroidota
TTG
Gln
>WENV180001259
FLNX01000940
415558
Bacteroidota
TTG
Gln
>WENV180001445
FLNX01001836
415558
Bacteroidota
TTG
Gln
>WENV180001599
FLNX01002726
415558
Bacteroidota
TTG
Gln
>WENV180001776
FLNX01003127
167013
Bacteroidota
TGG
Pro
>WENV180001309
FLNX01001333
44852
Bacteroidota
TAA
Leu
>WENV180001119
FLNX01000021
238606
Bacteroidota
CGG
Pro
>WENV180001313
FLNX01001337
338165
Bacteroidota
GGT
Thr
>WENV180001329
FLNX01001466
132360
Bacteroidota
GGG
Pro
>WENV180001393
FLNX01001713
353927
Bacteroidota
TTC
Glu
>WENV180001956
FLNX01004299
353927
Bacteroidota
TTC
Glu
>WENV180001957
FLNX01004299
353927
Bacteroidota
TTC
Glu
>WENV180001211
FLNX01000412
412236
Bacteroidota
CCC
Gly
>WENV180001176
FLNX01000141
146764
Bacteroidota
GTC
Asp
>WENV180001177
FLNX01000141
146764
Bacteroidota
GTC
Asp
>WENV180001198
FLNX01000284
59498
Bacteroidota
GAG
Leu
>WENV180001425
FLNX01001797
59498
Bacteroidota
GAG
Leu
>WENV180001583
FLNX01002707
59498
Bacteroidota
GAG
Leu
>WENV180001775
FLNX01003127
59498
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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