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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170575971
FPHW01000019
247974
Gammaproteobacteria
CCA
Trp
>WENV170575988
FPHW01000167
276551
Gammaproteobacteria
GAA
Phe
>WENV170575997
FPHW01000223
276551
Gammaproteobacteria
GAA
Phe
>WENV170575970
FPHW01000016
411842
Gammaproteobacteria
GCA
Cys
>WENV170575990
FPHW01000171
411842
Gammaproteobacteria
GCA
Cys
>WENV170575969
FPHW01000016
270352
Gammaproteobacteria
GCC
Gly
>WENV170575989
FPHW01000171
270352
Gammaproteobacteria
GCC
Gly
>WENV170575993
FPHW01000205
270352
Gammaproteobacteria
GCC
Gly
>WENV170575985
FPHW01000155
236366
Gammaproteobacteria
GTG
His
>WENV170575987
FPHW01000160
236013
Gammaproteobacteria
TGC
Ala
>WENV170576001
FPHW01000249
288517
Gammaproteobacteria
TGT
Thr
>WENV170575979
FPHW01000126
344326
Gammaproteobacteria
TTC
Glu
>WENV170575999
FPHW01000243
344326
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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