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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170577027
FRDC01002814
339149
Alphaproteobacteria
GTT
Asn
>WENV170577088
FRDC01003082
155663
Alphaproteobacteria
CCG
Arg
>WENV170577251
FRDC01004238
155663
Alphaproteobacteria
CCG
Arg
>WENV170576173
FRDC01000004
268154
Alphaproteobacteria
TGT
Thr
>WENV170576287
FRDC01000316
268154
Alphaproteobacteria
TGT
Thr
>WENV170577364
FRDC01004907
300133
Alphaproteobacteria
TAC
Val
>WENV170576835
FRDC01001869
27392
Alphaproteobacteria
GGA
Ser
>WENV170576522
FRDC01000799
146864
Alphaproteobacteria
TGG
Pro
>WENV170577277
FRDC01004295
202510
Alphaproteobacteria
TGG
Pro
>WENV170577366
FRDC01004917
352247
Alphaproteobacteria
TTG
Gln
>WENV170576906
FRDC01002136
81091
Alphaproteobacteria
GTA
Tyr
>WENV170576408
FRDC01000560
23685
Alphaproteobacteria
CGA
Ser
>WENV170577089
FRDC01003085
202487
Alphaproteobacteria
CAT
Met
>WENV170576199
FRDC01000075
31506
Alphaproteobacteria
TGA
Ser
>WENV170576222
FRDC01000167
31506
Alphaproteobacteria
TGA
Ser
>WENV170576174
FRDC01000008
236134
Alphaproteobacteria
TAC
Val
>WENV170576380
FRDC01000507
236134
Alphaproteobacteria
TAC
Val
>WENV170576523
FRDC01000799
146858
Alphaproteobacteria
TCT
Arg
>WENV170576651
FRDC01001269
339457
Alphaproteobacteria
>WENV170577026
FRDC01002814
412154
Alphaproteobacteria
GCA
Cys
>WENV170576941
FRDC01002340
95946
Alphaproteobacteria
GTA
Tyr
>WENV170576900
FRDC01002086
95924
Alphaproteobacteria
GAG
Leu
>WENV170577365
FRDC01004907
192195
Alphaproteobacteria
GTC
Asp
>WENV170576982
FRDC01002537
364533
Alphaproteobacteria
GCC
Gly
>WENV170577096
FRDC01003155
29390
Alphaproteobacteria
CGA
Ser
>WENV170576894
FRDC01002079
237281
Alphaproteobacteria
CGT
Thr
>WENV170576345
FRDC01000414
24189
Alphaproteobacteria
CGA
Ser
>WENV170576539
FRDC01000847
339465
Alphaproteobacteria
GGT
Thr
>WENV170577029
FRDC01002814
237479
Alphaproteobacteria
TTT
Lys
>WENV170576273
FRDC01000285
96322
Alphaproteobacteria
CAA
Leu
>WENV170576574
FRDC01000954
412153
Alphaproteobacteria
CTG
Gln
>WENV170576739
FRDC01001637
95925
Alphaproteobacteria
CAA
Leu
>WENV170576540
FRDC01000847
352138
Alphaproteobacteria
TTG
Gln
>WENV170576291
FRDC01000339
430481
Alphaproteobacteria
GCA
Cys
>WENV170576449
FRDC01000615
430481
Alphaproteobacteria
GCA
Cys
>WENV170576179
FRDC01000032
268598
Alphaproteobacteria
GAA
Phe
>WENV170577372
FRDC01004987
259072
Alphaproteobacteria
CGC
Ala
>WENV170576905
FRDC01002136
345469
Alphaproteobacteria
TGT
Thr
>WENV170577133
FRDC01003531
345469
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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