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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180020293
FTCZ01001250
426418
Alphaproteobacteria
CTG
Gln
>WENV180020294
FTCZ01001254
59382
Alphaproteobacteria
CAG
Leu
>WENV180020330
FTCZ01001615
96238
Alphaproteobacteria
GAG
Leu
>WENV180020465
FTCZ01004321
96238
Alphaproteobacteria
GAG
Leu
>WENV180020620
FTCZ01007501
412798
Alphaproteobacteria
CTG
Gln
>WENV180020279
FTCZ01000919
299458
Alphaproteobacteria
CTT
Lys
>WENV180020413
FTCZ01003203
146864
Alphaproteobacteria
TGG
Pro
>WENV180020508
FTCZ01005098
237489
Alphaproteobacteria
CAT
Met
>WENV180020345
FTCZ01001846
343013
Alphaproteobacteria
TTC
Glu
>WENV180020430
FTCZ01003651
114616
Alphaproteobacteria
GTA
Tyr
>WENV180020587
FTCZ01006684
199776
Alphaproteobacteria
CGG
Pro
>WENV180020368
FTCZ01002131
23685
Alphaproteobacteria
CGA
Ser
>WENV180020571
FTCZ01006300
256971
Alphaproteobacteria
TGT
Thr
>WENV180020678
FTCZ01008224
203135
Alphaproteobacteria
TCT
Arg
>WENV180020668
FTCZ01008120
7609
Alphaproteobacteria
GCT
Ser
>WENV180020277
FTCZ01000904
95928
Alphaproteobacteria
TAG
Leu
>WENV180020467
FTCZ01004325
108676
Alphaproteobacteria
CAA
Leu
>WENV180020547
FTCZ01005934
294221
Alphaproteobacteria
GAA
Phe
>WENV180020670
FTCZ01008167
23624
Alphaproteobacteria
GGA
Ser
>WENV180020369
FTCZ01002187
235839
Alphaproteobacteria
GTG
His
>WENV180020663
FTCZ01008043
377852
Alphaproteobacteria
TGT
Thr
>WENV180020329
FTCZ01001600
338496
Alphaproteobacteria
CAT
Met
>WENV180020596
FTCZ01006922
166353
Alphaproteobacteria
ACG
Arg
>WENV180020660
FTCZ01007966
166353
Alphaproteobacteria
ACG
Arg
>WENV180020341
FTCZ01001702
82652
Alphaproteobacteria
GTA
Tyr
>WENV180020392
FTCZ01002699
82652
Alphaproteobacteria
GTA
Tyr
>WENV180020383
FTCZ01002510
170352
Alphaproteobacteria
TCT
Arg
>WENV180020499
FTCZ01004947
146818
Alphaproteobacteria
CAT
Met
>WENV180020362
FTCZ01002045
339495
Alphaproteobacteria
>WENV180020246
FTCZ01000533
23427
Alphaproteobacteria
CGA
Ser
>WENV180020363
FTCZ01002059
319584
Alphaproteobacteria
CGC
Ala
>WENV180020601
FTCZ01007100
244489
Alphaproteobacteria
CTT
Lys
>WENV180020616
FTCZ01007378
244489
Alphaproteobacteria
CTT
Lys
>WENV180020393
FTCZ01002715
59118
Alphaproteobacteria
CAG
Leu
>WENV180020478
FTCZ01004534
59118
Alphaproteobacteria
CAG
Leu
>WENV180020407
FTCZ01003066
95938
Alphaproteobacteria
GTA
Tyr
>WENV180020528
FTCZ01005484
289655
Alphaproteobacteria
GGC
Ala
>WENV180020435
FTCZ01003785
146914
Alphaproteobacteria
GTG
His
>WENV180020402
FTCZ01002981
152510
Alphaproteobacteria
GGG
Pro
>WENV180020454
FTCZ01004195
432316
Alphaproteobacteria
GCA
Cys
>WENV180020431
FTCZ01003651
424918
Alphaproteobacteria
TCC
Gly
>WENV180020412
FTCZ01003164
257056
Alphaproteobacteria
CGT
Thr
>WENV180020229
FTCZ01000252
96322
Alphaproteobacteria
CAA
Leu
>WENV180020371
FTCZ01002187
366631
Alphaproteobacteria
TAC
Val
>WENV180020658
FTCZ01007961
391151
Alphaproteobacteria
TAC
Val
>WENV180020370
FTCZ01002187
96930
Alphaproteobacteria
TAG
Leu
>WENV180020259
FTCZ01000822
236045
Alphaproteobacteria
CGT
Thr
>WENV180020379
FTCZ01002313
268598
Alphaproteobacteria
GAA
Phe
>WENV180020673
FTCZ01008182
268598
Alphaproteobacteria
GAA
Phe
>WENV180020295
FTCZ01001293
345469
Alphaproteobacteria
TGT
Thr
>WENV180020488
FTCZ01004739
345469
Alphaproteobacteria
TGT
Thr
>WENV180020583
FTCZ01006617
10729
Alphaproteobacteria
GCT
Ser
>WENV180020301
FTCZ01001304
98812
Alphaproteobacteria
CAG
Leu
>WENV180020498
FTCZ01004933
98812
Alphaproteobacteria
CAG
Leu
>WENV180020366
FTCZ01002086
96061
Alphaproteobacteria
CAA
Leu
>WENV180020489
FTCZ01004753
237574
Alphaproteobacteria
TGT
Thr
>WENV180020533
FTCZ01005642
203134
Alphaproteobacteria
GTG
His
>WENV180020625
FTCZ01007602
203134
Alphaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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