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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180028206
FTJA01003482
29895
Alphaproteobacteria
TGA
Ser
>WENV180028211
FTJA01004259
29895
Alphaproteobacteria
TGA
Ser
>WENV180028457
FTJA01594535
59361
Alphaproteobacteria
GAG
Leu
>WENV180028332
FTJA01098173
58865
Alphaproteobacteria
GAG
Leu
>WENV180028307
FTJA01064026
366247
Alphaproteobacteria
TAC
Val
>WENV180028411
FTJA01228577
96188
Alphaproteobacteria
CAG
Leu
>WENV180028388
FTJA01182826
383873
Alphaproteobacteria
>WENV180028416
FTJA01241908
412260
Alphaproteobacteria
TCC
Gly
>WENV180028150
FTJA01000297
97145
Alphaproteobacteria
TAG
Leu
>WENV180028151
FTJA01000297
97145
Alphaproteobacteria
TAG
Leu
>WENV180028201
FTJA01003181
341164
Alphaproteobacteria
GCC
Gly
>WENV180028297
FTJA01058271
243806
Alphaproteobacteria
CCA
Trp
>WENV180028285
FTJA01047953
24189
Alphaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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