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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170640999
JFJP01032112
255852
Gammaproteobacteria
TTC
Glu
>WENV170641000
JFJP01032135
255852
Gammaproteobacteria
TTC
Glu
>WENV170641001
JFJP01032135
255852
Gammaproteobacteria
TTC
Glu
>WENV170641002
JFJP01032148
255852
Gammaproteobacteria
TTC
Glu
>WENV170639495
JFJP01003571
266356
Gammaproteobacteria
GAA
Phe
>WENV170639532
JFJP01004133
266356
Gammaproteobacteria
GAA
Phe
>WENV170641076
JFJP01033299
96672
Gammaproteobacteria
TAG
Leu
>WENV170639780
JFJP01007610
175987
Gammaproteobacteria
CGG
Pro
>WENV170639797
JFJP01008127
145562
Gammaproteobacteria
CAT
Met
>WENV170640998
JFJP01032112
292565
Gammaproteobacteria
TTC
Glu
>WENV170640965
JFJP01031708
237412
Gammaproteobacteria
TAC
Val
>WENV170640982
JFJP01031884
237412
Gammaproteobacteria
TAC
Val
>WENV170641063
JFJP01033172
411596
Gammaproteobacteria
GCA
Cys
>WENV170641071
JFJP01033271
411596
Gammaproteobacteria
GCA
Cys
>WENV170639674
JFJP01005809
428943
Gammaproteobacteria
>WENV170639778
JFJP01007505
425813
Gammaproteobacteria
GCA
Cys
>WENV170640967
JFJP01031717
16374
Gammaproteobacteria
GCT
Ser
>WENV170639770
JFJP01007358
101786
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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