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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170646381
JQGR01000569
103203
Gammaproteobacteria
>WENV170646395
JQGR01001093
44883
Gammaproteobacteria
GGA
Ser
>WENV170646401
JQGR01001387
374812
Gammaproteobacteria
TCC
Gly
>WENV170646408
JQGR01002405
149315
Gammaproteobacteria
GAC
Val
>WENV170646409
JQGR01002729
95613
Gammaproteobacteria
CAA
Leu
>WENV170646410
JQGR01002730
267224
Gammaproteobacteria
GTT
Asn
>WENV170646411
JQGR01002747
243322
Gammaproteobacteria
CAT
Met
>WENV170646413
JQGR01002895
235489
Gammaproteobacteria
GTG
His
>WENV170646418
JQGR01002915
195299
Gammaproteobacteria
CAT
Met
>WENV170646417
JQGR01002915
99319
Gammaproteobacteria
GAG
Leu
>WENV170646435
JQGR01004023
144917
Gammaproteobacteria
>WENV170646441
JQGR01004464
144995
Gammaproteobacteria
GAT
Ile
>WENV170646447
JQGR01006319
235452
Gammaproteobacteria
GAA
Phe
>WENV170646465
JQGR01009269
144917
Gammaproteobacteria
>WENV170646467
JQGR01009961
147026
Gammaproteobacteria
GAT
Ile
>WENV170646476
JQGR01011892
147023
Gammaproteobacteria
CAT
Met
>WENV170646477
JQGR01011892
96362
Gammaproteobacteria
TAG
Leu
>WENV170646481
JQGR01012682
235449
Gammaproteobacteria
>WENV170646483
JQGR01013081
279906
Gammaproteobacteria
TGC
Ala
>WENV170646487
JQGR01014070
374812
Gammaproteobacteria
TCC
Gly
>WENV170646488
JQGR01014145
235452
Gammaproteobacteria
GAA
Phe
>WENV170646500
JQGR01015643
235452
Gammaproteobacteria
GAA
Phe
>WENV170646508
JQGR01017701
145000
Gammaproteobacteria
GTC
Asp
>WENV170646513
JQGR01018017
235449
Gammaproteobacteria
>WENV170646514
JQGR01018067
237221
Gammaproteobacteria
GGC
Ala
>WENV170646517
JQGR01019580
70457
Gammaproteobacteria
TAA
Leu
>WENV170646518
JQGR01019596
103203
Gammaproteobacteria
>WENV170646519
JQGR01019657
235449
Gammaproteobacteria
>WENV170646520
JQGR01019657
195299
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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