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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170651087
JRYF01000571
256200
Betaproteobacteria
CGT
Thr
>WENV170651140
JRYF01001152
301533
Betaproteobacteria
GTG
His
>WENV170651147
JRYF01001224
59085
Betaproteobacteria
TAG
Leu
>WENV170651199
JRYF01002451
146726
Betaproteobacteria
TCT
Arg
>WENV170651204
JRYF01002542
307571
Betaproteobacteria
CGC
Ala
>WENV170651288
JRYF01005385
147666
Betaproteobacteria
CAT
Met
>WENV170651307
JRYF01006167
152292
Betaproteobacteria
TTG
Gln
>WENV170651308
JRYF01006168
152292
Betaproteobacteria
TTG
Gln
>WENV170651330
JRYF01007142
313235
Betaproteobacteria
TTC
Glu
>WENV170651336
JRYF01007236
307571
Betaproteobacteria
CGC
Ala
>WENV170651358
JRYF01008710
256200
Betaproteobacteria
CGT
Thr
>WENV170651403
JRYF01011803
186087
Betaproteobacteria
GGG
Pro
>WENV170651447
JRYF01018250
266855
Betaproteobacteria
CAT
Met
>WENV170651452
JRYF01019061
147666
Betaproteobacteria
CAT
Met
>WENV170651500
JRYF01033892
162406
Betaproteobacteria
CAT
Met
>WENV170651620
JRYF01142889
96247
Betaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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