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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170652338
JRYH01000990
365250
Alphaproteobacteria
GCC
Gly
>WENV170652249
JRYH01000303
351461
Alphaproteobacteria
TTG
Gln
>WENV170652271
JRYH01000461
351461
Alphaproteobacteria
TTG
Gln
>WENV170652754
JRYH01022563
351461
Alphaproteobacteria
TTG
Gln
>WENV170652439
JRYH01003333
248021
Alphaproteobacteria
CTT
Lys
>WENV170652697
JRYH01016230
147089
Alphaproteobacteria
ACG
Arg
>WENV170652874
JRYH01064542
113700
Alphaproteobacteria
>WENV170652193
JRYH01000027
345452
Alphaproteobacteria
GAC
Val
>WENV170652204
JRYH01000079
345452
Alphaproteobacteria
GAC
Val
>WENV170652405
JRYH01002209
345452
Alphaproteobacteria
GAC
Val
>WENV170652653
JRYH01011267
345452
Alphaproteobacteria
GAC
Val
>WENV170652585
JRYH01007411
338282
Alphaproteobacteria
GTT
Asn
>WENV170652674
JRYH01013340
95928
Alphaproteobacteria
TAG
Leu
>WENV170652194
JRYH01000028
342732
Alphaproteobacteria
CCC
Gly
>WENV170652306
JRYH01000678
342732
Alphaproteobacteria
CCC
Gly
>WENV170652957
JRYH01143765
236134
Alphaproteobacteria
TAC
Val
>WENV170652485
JRYH01004557
77433
Alphaproteobacteria
CAG
Leu
>WENV170652483
JRYH01004465
147879
Alphaproteobacteria
TGG
Pro
>WENV170652926
JRYH01109944
412154
Alphaproteobacteria
GCA
Cys
>WENV170652198
JRYH01000044
159395
Alphaproteobacteria
GTC
Asp
>WENV170652254
JRYH01000325
345492
Alphaproteobacteria
TAC
Val
>WENV170652276
JRYH01000507
147361
Alphaproteobacteria
GGG
Pro
>WENV170652341
JRYH01001010
253273
Alphaproteobacteria
CTT
Lys
>WENV170652392
JRYH01002061
253273
Alphaproteobacteria
CTT
Lys
>WENV170652390
JRYH01002036
243304
Alphaproteobacteria
TTC
Glu
>WENV170652493
JRYH01004851
192195
Alphaproteobacteria
GTC
Asp
>WENV170652314
JRYH01000753
151730
Alphaproteobacteria
CCG
Arg
>WENV170652253
JRYH01000325
104569
Alphaproteobacteria
TAG
Leu
>WENV170652262
JRYH01000403
161002
Alphaproteobacteria
GTG
His
>WENV170652429
JRYH01003043
164825
Alphaproteobacteria
GAT
Ile
>WENV170652211
JRYH01000097
254522
Alphaproteobacteria
GAA
Phe
>WENV170652422
JRYH01002690
289655
Alphaproteobacteria
GGC
Ala
>WENV170652695
JRYH01015986
59164
Alphaproteobacteria
GAG
Leu
>WENV170652865
JRYH01057550
163860
Alphaproteobacteria
GGG
Pro
>WENV170652609
JRYH01008797
354623
Alphaproteobacteria
GAC
Val
>WENV170652810
JRYH01033772
338760
Alphaproteobacteria
GAA
Phe
>WENV170652823
JRYH01037546
319925
Alphaproteobacteria
TGT
Thr
>WENV170652910
JRYH01095099
401200
Alphaproteobacteria
GTT
Asn
>WENV170652821
JRYH01037083
412424
Alphaproteobacteria
TCC
Gly
>WENV170652224
JRYH01000123
146852
Alphaproteobacteria
GTC
Asp
>WENV170652267
JRYH01000430
146852
Alphaproteobacteria
GTC
Asp
>WENV170652476
JRYH01004121
114040
Alphaproteobacteria
CAA
Leu
>WENV170652564
JRYH01006458
166738
Alphaproteobacteria
CCT
Arg
>WENV170652582
JRYH01007175
33688
Alphaproteobacteria
CGA
Ser
>WENV170652311
JRYH01000703
98812
Alphaproteobacteria
CAG
Leu
>WENV170652411
JRYH01002376
98812
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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