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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170653154
JRYI01008046
155663
Alphaproteobacteria
CCG
Arg
>WENV170653347
JRYI01091915
146864
Alphaproteobacteria
TGG
Pro
>WENV170653167
JRYI01009247
97676
Alphaproteobacteria
CAG
Leu
>WENV170653296
JRYI01055160
81091
Alphaproteobacteria
GTA
Tyr
>WENV170653184
JRYI01013612
340310
Alphaproteobacteria
CAC
Val
>WENV170653224
JRYI01023250
412154
Alphaproteobacteria
GCA
Cys
>WENV170653168
JRYI01009285
243630
Alphaproteobacteria
GAA
Phe
>WENV170653378
JRYI01129305
243630
Alphaproteobacteria
GAA
Phe
>WENV170653238
JRYI01028499
23627
Alphaproteobacteria
GGA
Ser
>WENV170653274
JRYI01042384
243803
Alphaproteobacteria
CAT
Met
>WENV170653040
JRYI01001270
253273
Alphaproteobacteria
CTT
Lys
>WENV170653264
JRYI01037326
339305
Alphaproteobacteria
GGT
Thr
>WENV170653166
JRYI01009083
146852
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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