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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170654476
JRYL01000022
145695
Betaproteobacteria
GGG
Pro
>WENV170654502
JRYL01000132
146726
Betaproteobacteria
TCT
Arg
>WENV170654503
JRYL01000134
303627
Betaproteobacteria
TTT
Lys
>WENV170654504
JRYL01000144
245575
Betaproteobacteria
CGT
Thr
>WENV170654535
JRYL01000222
304536
Betaproteobacteria
TGT
Thr
>WENV170654553
JRYL01000496
147332
Betaproteobacteria
CAT
Met
>WENV170654587
JRYL01001062
283660
Betaproteobacteria
TTC
Glu
>WENV170654591
JRYL01001237
301533
Betaproteobacteria
GTG
His
>WENV170654611
JRYL01002067
4681
Betaproteobacteria
GCT
Ser
>WENV170654620
JRYL01002280
162406
Betaproteobacteria
CAT
Met
>WENV170654692
JRYL01005599
238206
Betaproteobacteria
CTT
Lys
>WENV170654696
JRYL01006630
238204
Betaproteobacteria
TGC
Ala
>WENV170654704
JRYL01007141
412344
Betaproteobacteria
GCA
Cys
>WENV170654716
JRYL01008245
253279
Betaproteobacteria
GTG
His
>WENV170654715
JRYL01008245
147509
Betaproteobacteria
TCT
Arg
>WENV170654718
JRYL01008885
238203
Betaproteobacteria
TGT
Thr
>WENV170654721
JRYL01009391
162407
Betaproteobacteria
ACG
Arg
>WENV170654723
JRYL01009466
98424
Betaproteobacteria
CAA
Leu
>WENV170654736
JRYL01010788
238204
Betaproteobacteria
TGC
Ala
>WENV170654762
JRYL01014180
303627
Betaproteobacteria
TTT
Lys
>WENV170654801
JRYL01023830
304536
Betaproteobacteria
TGT
Thr
>WENV170654802
JRYL01023830
95620
Betaproteobacteria
GTA
Tyr
>WENV170654850
JRYL01039720
147509
Betaproteobacteria
TCT
Arg
>WENV170654923
JRYL01089915
48899
Betaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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