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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
121 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170658479
JTFP01120355
144980
Gammaproteobacteria
CCG
Arg
>WENV170657771
JTFP01017814
145317
Gammaproteobacteria
ACG
Arg
>WENV170658051
JTFP01049275
145317
Gammaproteobacteria
ACG
Arg
>WENV170658526
JTFP01133560
299821
Gammaproteobacteria
TTC
Glu
>WENV170657853
JTFP01026659
340342
Gammaproteobacteria
TTG
Gln
>WENV170658054
JTFP01049275
6971
Gammaproteobacteria
GCT
Ser
>WENV170658430
JTFP01111145
6971
Gammaproteobacteria
GCT
Ser
>WENV170658009
JTFP01043577
158396
Gammaproteobacteria
ACG
Arg
>WENV170658050
JTFP01049275
158396
Gammaproteobacteria
ACG
Arg
>WENV170658052
JTFP01049275
158396
Gammaproteobacteria
ACG
Arg
>WENV170658053
JTFP01049275
158396
Gammaproteobacteria
ACG
Arg
>WENV170658431
JTFP01111145
158396
Gammaproteobacteria
ACG
Arg
>WENV170658674
JTFP01177520
158396
Gammaproteobacteria
ACG
Arg
>WENV170657852
JTFP01026659
144784
Gammaproteobacteria
CAT
Met
>WENV170657854
JTFP01026659
144784
Gammaproteobacteria
CAT
Met
>WENV170658094
JTFP01054209
144784
Gammaproteobacteria
CAT
Met
>WENV170658225
JTFP01070388
144784
Gammaproteobacteria
CAT
Met
>WENV170658504
JTFP01127555
144784
Gammaproteobacteria
CAT
Met
>WENV170657910
JTFP01032623
144950
Gammaproteobacteria
GGG
Pro
>WENV170657718
JTFP01011716
235516
Gammaproteobacteria
GTG
His
>WENV170657738
JTFP01013234
249887
Gammaproteobacteria
GGT
Thr
>WENV170657971
JTFP01038499
144790
Gammaproteobacteria
CGG
Pro
>WENV170658322
JTFP01086984
144790
Gammaproteobacteria
CGG
Pro
>WENV170657855
JTFP01026659
113614
Gammaproteobacteria
TAG
Leu
>WENV170657549
JTFP01001195
16301
Gammaproteobacteria
TGA
Ser
>WENV170657902
JTFP01031680
80994
Gammaproteobacteria
CAG
Leu
>WENV170657903
JTFP01031680
80994
Gammaproteobacteria
CAG
Leu
>WENV170657926
JTFP01034403
80994
Gammaproteobacteria
CAG
Leu
>WENV170658340
JTFP01090324
113619
Gammaproteobacteria
>WENV170657719
JTFP01011716
107766
Gammaproteobacteria
TAG
Leu
>WENV170657720
JTFP01011717
107766
Gammaproteobacteria
TAG
Leu
>WENV170658505
JTFP01127621
107766
Gammaproteobacteria
TAG
Leu
>WENV170658581
JTFP01150677
107766
Gammaproteobacteria
TAG
Leu
>WENV170658580
JTFP01149766
144788
Gammaproteobacteria
>WENV170658019
JTFP01045181
411729
Gammaproteobacteria
>WENV170658574
JTFP01147833
95614
Gammaproteobacteria
>WENV170658239
JTFP01073630
195519
Gammaproteobacteria
CAT
Met
>WENV170658222
JTFP01069701
307413
Gammaproteobacteria
TTT
Lys
>WENV170658427
JTFP01110234
307413
Gammaproteobacteria
TTT
Lys
>WENV170658092
JTFP01054209
349672
Gammaproteobacteria
TTG
Gln
>WENV170658093
JTFP01054209
349672
Gammaproteobacteria
TTG
Gln
>WENV170657934
JTFP01035954
144952
Gammaproteobacteria
GAT
Ile
>WENV170657970
JTFP01038477
236119
Gammaproteobacteria
GGT
Thr
>WENV170657962
JTFP01037478
147122
Gammaproteobacteria
GGG
Pro
>WENV170658216
JTFP01068684
16245
Gammaproteobacteria
TGA
Ser
>WENV170658326
JTFP01087556
144954
Gammaproteobacteria
ACG
Arg
>WENV170657911
JTFP01032682
95725
Gammaproteobacteria
CAA
Leu
>WENV170658371
JTFP01094248
162284
Gammaproteobacteria
CCA
Trp
>WENV170657942
JTFP01036377
266823
Gammaproteobacteria
GTT
Asn
>WENV170657890
JTFP01031231
144793
Gammaproteobacteria
GAC
Val
>WENV170657891
JTFP01031231
144793
Gammaproteobacteria
GAC
Val
>WENV170658040
JTFP01048201
144793
Gammaproteobacteria
GAC
Val
>WENV170658286
JTFP01081197
44883
Gammaproteobacteria
GGA
Ser
>WENV170658629
JTFP01164831
44883
Gammaproteobacteria
GGA
Ser
>WENV170658144
JTFP01059573
147642
Gammaproteobacteria
TGG
Pro
>WENV170657995
JTFP01042239
148441
Gammaproteobacteria
TGG
Pro
>WENV170658015
JTFP01044246
148441
Gammaproteobacteria
TGG
Pro
>WENV170657796
JTFP01020671
107081
Gammaproteobacteria
TAG
Leu
>WENV170657916
JTFP01033014
107081
Gammaproteobacteria
TAG
Leu
>WENV170658320
JTFP01086846
107081
Gammaproteobacteria
TAG
Leu
>WENV170657990
JTFP01041874
235824
Gammaproteobacteria
GTG
His
>WENV170657992
JTFP01041874
235824
Gammaproteobacteria
GTG
His
>WENV170657936
JTFP01036084
254436
Gammaproteobacteria
GTT
Asn
>WENV170658016
JTFP01044669
254436
Gammaproteobacteria
GTT
Asn
>WENV170657861
JTFP01026924
56673
Gammaproteobacteria
GGA
Ser
>WENV170657877
JTFP01028280
56673
Gammaproteobacteria
GGA
Ser
>WENV170657988
JTFP01041697
56673
Gammaproteobacteria
GGA
Ser
>WENV170658095
JTFP01054619
56673
Gammaproteobacteria
GGA
Ser
>WENV170658294
JTFP01083139
56673
Gammaproteobacteria
GGA
Ser
>WENV170658297
JTFP01083262
56673
Gammaproteobacteria
GGA
Ser
>WENV170657736
JTFP01013234
113107
Gammaproteobacteria
GTA
Tyr
>WENV170657770
JTFP01017814
145320
Gammaproteobacteria
ACG
Arg
>WENV170658120
JTFP01057112
235486
Gammaproteobacteria
GTT
Asn
>WENV170658471
JTFP01118264
235486
Gammaproteobacteria
GTT
Asn
>WENV170658473
JTFP01118264
235486
Gammaproteobacteria
GTT
Asn
>WENV170658041
JTFP01048201
151913
Gammaproteobacteria
GAC
Val
>WENV170657725
JTFP01012387
254317
Gammaproteobacteria
TAC
Val
>WENV170658219
JTFP01069701
254317
Gammaproteobacteria
TAC
Val
>WENV170658221
JTFP01069701
254317
Gammaproteobacteria
TAC
Val
>WENV170658429
JTFP01110985
235317
Gammaproteobacteria
GGT
Thr
>WENV170657831
JTFP01024457
23429
Gammaproteobacteria
GGA
Ser
>WENV170657996
JTFP01042239
161470
Gammaproteobacteria
TCT
Arg
>WENV170658684
JTFP01180372
161470
Gammaproteobacteria
TCT
Arg
>WENV170657880
JTFP01028935
319098
Gammaproteobacteria
TAC
Val
>WENV170658312
JTFP01084634
144915
Gammaproteobacteria
CCG
Arg
>WENV170658089
JTFP01053786
148304
Gammaproteobacteria
GGG
Pro
>WENV170657793
JTFP01020335
269720
Gammaproteobacteria
GTT
Asn
>WENV170657937
JTFP01036084
269720
Gammaproteobacteria
GTT
Asn
>WENV170658418
JTFP01108944
269720
Gammaproteobacteria
GTT
Asn
>WENV170658102
JTFP01054912
238369
Gammaproteobacteria
GCC
Gly
>WENV170657904
JTFP01031738
153036
Gammaproteobacteria
CCT
Arg
>WENV170657768
JTFP01017273
410215
Gammaproteobacteria
TTG
Gln
>WENV170658601
JTFP01159299
410215
Gammaproteobacteria
TTG
Gln
>WENV170658602
JTFP01159299
410215
Gammaproteobacteria
TTG
Gln
>WENV170657984
JTFP01040695
9458
Gammaproteobacteria
GCT
Ser
>WENV170658743
JTFP01199175
193275
Gammaproteobacteria
GAT
Ile
>WENV170658295
JTFP01083167
319100
Gammaproteobacteria
GGT
Thr
>WENV170658578
JTFP01149072
319100
Gammaproteobacteria
GGT
Thr
>WENV170658018
JTFP01045181
58760
Gammaproteobacteria
>WENV170658722
JTFP01190659
58760
Gammaproteobacteria
>WENV170658576
JTFP01147833
237749
Gammaproteobacteria
GGT
Thr
>WENV170658321
JTFP01086846
401784
Gammaproteobacteria
TTG
Gln
>WENV170657780
JTFP01018938
189760
Gammaproteobacteria
TGG
Pro
>WENV170657991
JTFP01041874
189760
Gammaproteobacteria
TGG
Pro
>WENV170657993
JTFP01041874
189760
Gammaproteobacteria
TGG
Pro
>WENV170658121
JTFP01057142
189760
Gammaproteobacteria
TGG
Pro
>WENV170657604
JTFP01004696
83458
Gammaproteobacteria
CAG
Leu
>WENV170658611
JTFP01161183
45459
Gammaproteobacteria
GGA
Ser
>WENV170657557
JTFP01001406
58859
Gammaproteobacteria
CAG
Leu
>WENV170657885
JTFP01029449
315566
Gammaproteobacteria
GTG
His
>WENV170658508
JTFP01128603
235490
Gammaproteobacteria
GGT
Thr
>WENV170658310
JTFP01084531
251608
Gammaproteobacteria
GAA
Phe
>WENV170658355
JTFP01092334
162567
Gammaproteobacteria
CAT
Met
>WENV170658232
JTFP01072926
235319
Gammaproteobacteria
TAC
Val
>WENV170658605
JTFP01160376
235319
Gammaproteobacteria
TAC
Val
>WENV170658607
JTFP01160376
235319
Gammaproteobacteria
TAC
Val
>WENV170658703
JTFP01183990
24403
Gammaproteobacteria
TGA
Ser
>WENV170657582
JTFP01003451
238069
Gammaproteobacteria
CAT
Met
>WENV170658122
JTFP01057142
235489
Gammaproteobacteria
GTG
His
>WENV170658460
JTFP01115858
147127
Gammaproteobacteria
GTT
Asn
>WENV170658461
JTFP01115858
147127
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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