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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170658959
JUGB01002058
165250
Alphaproteobacteria
TGG
Pro
>WENV170658929
JUGB01000198
350475
Alphaproteobacteria
GGT
Thr
>WENV170658926
JUGB01000105
251568
Alphaproteobacteria
CCA
Trp
>WENV170658940
JUGB01000738
114616
Alphaproteobacteria
GTA
Tyr
>WENV170658951
JUGB01001479
156543
Alphaproteobacteria
TTT
Lys
>WENV170658975
JUGB01004643
61017
Alphaproteobacteria
CAG
Leu
>WENV170658974
JUGB01004341
341164
Alphaproteobacteria
GCC
Gly
>WENV170658955
JUGB01001611
10642
Alphaproteobacteria
GCT
Ser
>WENV170658941
JUGB01000738
424918
Alphaproteobacteria
TCC
Gly
>WENV170658970
JUGB01003425
152773
Alphaproteobacteria
GTG
His
>WENV170658967
JUGB01003210
257056
Alphaproteobacteria
CGT
Thr
>WENV170658958
JUGB01002008
25307
Alphaproteobacteria
GGA
Ser
>WENV170658956
JUGB01001620
25738
Alphaproteobacteria
TGA
Ser
>WENV170658952
JUGB01001554
237439
Alphaproteobacteria
CTT
Lys
>WENV170658937
JUGB01000709
237574
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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