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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170672498
LAZR01000232
238010
Alphaproteobacteria
TTT
Lys
>WENV170672757
LAZR01001545
238010
Alphaproteobacteria
TTT
Lys
>WENV170672309
LAZR01000058
339360
Alphaproteobacteria
>WENV170673852
LAZR01032169
365250
Alphaproteobacteria
GCC
Gly
>WENV170672679
LAZR01000823
248021
Alphaproteobacteria
CTT
Lys
>WENV170672500
LAZR01000232
80917
Alphaproteobacteria
CAG
Leu
>WENV170673055
LAZR01005156
80917
Alphaproteobacteria
CAG
Leu
>WENV170672705
LAZR01001012
267922
Alphaproteobacteria
CCA
Trp
>WENV170672716
LAZR01001052
267922
Alphaproteobacteria
CCA
Trp
>WENV170672396
LAZR01000111
241021
Alphaproteobacteria
GGC
Ala
>WENV170672721
LAZR01001116
241021
Alphaproteobacteria
GGC
Ala
>WENV170672303
LAZR01000055
113700
Alphaproteobacteria
>WENV170672715
LAZR01001044
113700
Alphaproteobacteria
>WENV170673906
LAZR01034377
113700
Alphaproteobacteria
>WENV170672341
LAZR01000065
238045
Alphaproteobacteria
TTC
Glu
>WENV170673931
LAZR01035278
256175
Alphaproteobacteria
TGT
Thr
>WENV170672447
LAZR01000169
176908
Alphaproteobacteria
GTC
Asp
>WENV170674287
LAZR01055663
338283
Alphaproteobacteria
CAC
Val
>WENV170672266
LAZR01000047
23671
Alphaproteobacteria
CGA
Ser
>WENV170674387
LAZR01062331
23671
Alphaproteobacteria
CGA
Ser
>WENV170673772
LAZR01027850
338282
Alphaproteobacteria
GTT
Asn
>WENV170673902
LAZR01034073
338282
Alphaproteobacteria
GTT
Asn
>WENV170672543
LAZR01000281
339723
Alphaproteobacteria
>WENV170673097
LAZR01006201
339723
Alphaproteobacteria
>WENV170673720
LAZR01024905
339723
Alphaproteobacteria
>WENV170672409
LAZR01000130
147083
Alphaproteobacteria
GGG
Pro
>WENV170672855
LAZR01002684
147083
Alphaproteobacteria
GGG
Pro
>WENV170674121
LAZR01045511
147083
Alphaproteobacteria
GGG
Pro
>WENV170672625
LAZR01000494
339846
Alphaproteobacteria
GAC
Val
>WENV170672362
LAZR01000079
339722
Alphaproteobacteria
TTG
Gln
>WENV170672925
LAZR01003244
339722
Alphaproteobacteria
TTG
Gln
>WENV170672301
LAZR01000055
80918
Alphaproteobacteria
GAG
Leu
>WENV170672713
LAZR01001044
80918
Alphaproteobacteria
GAG
Leu
>WENV170672784
LAZR01001990
147334
Alphaproteobacteria
CAT
Met
>WENV170672977
LAZR01003930
147334
Alphaproteobacteria
CAT
Met
>WENV170672265
LAZR01000047
27877
Alphaproteobacteria
GGA
Ser
>WENV170673120
LAZR01006771
27877
Alphaproteobacteria
GGA
Ser
>WENV170673924
LAZR01034935
27877
Alphaproteobacteria
GGA
Ser
>WENV170672652
LAZR01000619
113716
Alphaproteobacteria
CAA
Leu
>WENV170672397
LAZR01000112
412279
Alphaproteobacteria
CCC
Gly
>WENV170672793
LAZR01002192
412279
Alphaproteobacteria
CCC
Gly
>WENV170672441
LAZR01000160
252148
Alphaproteobacteria
TGT
Thr
>WENV170672785
LAZR01002022
252148
Alphaproteobacteria
TGT
Thr
>WENV170672205
LAZR01000030
23672
Alphaproteobacteria
GCT
Ser
>WENV170672656
LAZR01000670
23672
Alphaproteobacteria
GCT
Ser
>WENV170672714
LAZR01001044
340106
Alphaproteobacteria
GCC
Gly
>WENV170672915
LAZR01003223
167926
Alphaproteobacteria
CAT
Met
>WENV170673847
LAZR01031896
237281
Alphaproteobacteria
CGT
Thr
>WENV170673853
LAZR01032169
59164
Alphaproteobacteria
GAG
Leu
>WENV170672979
LAZR01003963
348781
Alphaproteobacteria
GAA
Phe
>WENV170673182
LAZR01007868
348781
Alphaproteobacteria
GAA
Phe
>WENV170672419
LAZR01000137
348781
Alphaproteobacteria
GAA
Phe
>WENV170672542
LAZR01000280
412477
Alphaproteobacteria
GCA
Cys
>WENV170674449
LAZR01066470
338760
Alphaproteobacteria
GAA
Phe
>WENV170674343
LAZR01058697
270451
Alphaproteobacteria
CGT
Thr
>WENV170672398
LAZR01000112
344517
Alphaproteobacteria
GTT
Asn
>WENV170672639
LAZR01000572
344517
Alphaproteobacteria
GTT
Asn
>WENV170672300
LAZR01000055
147283
Alphaproteobacteria
GTG
His
>WENV170673063
LAZR01005388
147283
Alphaproteobacteria
GTG
His
>WENV170673964
LAZR01037423
147283
Alphaproteobacteria
GTG
His
>WENV170672354
LAZR01000075
338288
Alphaproteobacteria
TTC
Glu
>WENV170672612
LAZR01000444
338288
Alphaproteobacteria
TTC
Glu
>WENV170672725
LAZR01001159
338288
Alphaproteobacteria
TTC
Glu
>WENV170672224
LAZR01000033
340294
Alphaproteobacteria
GGT
Thr
>WENV170673894
LAZR01033237
349650
Alphaproteobacteria
CAC
Val
>WENV170674036
LAZR01041102
413302
Alphaproteobacteria
CCC
Gly
>WENV170674288
LAZR01055663
254524
Alphaproteobacteria
TAC
Val
>WENV170672458
LAZR01000189
113715
Alphaproteobacteria
TAG
Leu
>WENV170672522
LAZR01000238
113715
Alphaproteobacteria
TAG
Leu
>WENV170673406
LAZR01013506
114040
Alphaproteobacteria
CAA
Leu
>WENV170672616
LAZR01000458
127020
Alphaproteobacteria
TCT
Arg
>WENV170673053
LAZR01005069
127020
Alphaproteobacteria
TCT
Arg
>WENV170672399
LAZR01000112
236256
Alphaproteobacteria
TAC
Val
>WENV170672869
LAZR01002828
236256
Alphaproteobacteria
TAC
Val
>WENV170672495
LAZR01000229
345469
Alphaproteobacteria
TGT
Thr
>WENV170672359
LAZR01000078
96061
Alphaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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