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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170675586
LDZP01000078
350432
Gammaproteobacteria
GTG
His
>WENV170675590
LDZP01000081
152460
Gammaproteobacteria
GGG
Pro
>WENV170675571
LDZP01000076
283840
Gammaproteobacteria
TTC
Glu
>WENV170675572
LDZP01000076
283840
Gammaproteobacteria
TTC
Glu
>WENV170675574
LDZP01000076
283840
Gammaproteobacteria
TTC
Glu
>WENV170675605
LDZP01000089
199984
Gammaproteobacteria
CAT
Met
>WENV170675620
LDZP01000146
199984
Gammaproteobacteria
CAT
Met
>WENV170675578
LDZP01000076
47425
Gammaproteobacteria
GGA
Ser
>WENV170675565
LDZP01000074
147114
Gammaproteobacteria
CCT
Arg
>WENV170675576
LDZP01000076
301997
Gammaproteobacteria
TTC
Glu
>WENV170675606
LDZP01000091
59172
Gammaproteobacteria
CAA
Leu
>WENV170675567
LDZP01000075
8480
Gammaproteobacteria
GCT
Ser
>WENV170675601
LDZP01000089
268812
Gammaproteobacteria
GTT
Asn
>WENV170675602
LDZP01000089
268812
Gammaproteobacteria
GTT
Asn
>WENV170675603
LDZP01000089
268812
Gammaproteobacteria
GTT
Asn
>WENV170675611
LDZP01000093
147118
Gammaproteobacteria
GAC
Val
>WENV170675612
LDZP01000093
147118
Gammaproteobacteria
GAC
Val
>WENV170675579
LDZP01000077
113688
Gammaproteobacteria
GTA
Tyr
>WENV170675584
LDZP01000078
146807
Gammaproteobacteria
TCT
Arg
>WENV170675588
LDZP01000080
147120
Gammaproteobacteria
CGG
Pro
>WENV170675616
LDZP01000113
237438
Gammaproteobacteria
GAA
Phe
>WENV170675600
LDZP01000084
147117
Gammaproteobacteria
GTC
Asp
>WENV170675597
LDZP01000084
147117
Gammaproteobacteria
GTC
Asp
>WENV170675598
LDZP01000084
147117
Gammaproteobacteria
GTC
Asp
>WENV170675619
LDZP01000133
147328
Gammaproteobacteria
CCG
Arg
>WENV170675568
LDZP01000075
158083
Gammaproteobacteria
ACG
Arg
>WENV170675569
LDZP01000075
158083
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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