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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170680369
LFCJ01009701
159514
Gammaproteobacteria
TGG
Pro
>WENV170679831
LFCJ01000690
59458
Gammaproteobacteria
CAG
Leu
>WENV170679832
LFCJ01000690
59458
Gammaproteobacteria
CAG
Leu
>WENV170679693
LFCJ01000149
412476
Gammaproteobacteria
TCC
Gly
>WENV170679774
LFCJ01000385
147118
Gammaproteobacteria
GAC
Val
>WENV170679775
LFCJ01000385
147118
Gammaproteobacteria
GAC
Val
>WENV170679692
LFCJ01000149
113870
Gammaproteobacteria
GTA
Tyr
>WENV170680470
LFCJ01012123
173040
Gammaproteobacteria
GAC
Val
>WENV170679926
LFCJ01001608
59415
Gammaproteobacteria
TAA
Leu
>WENV170680301
LFCJ01007564
251608
Gammaproteobacteria
GAA
Phe
>WENV170679604
LFCJ01000070
158083
Gammaproteobacteria
ACG
Arg
>WENV170679605
LFCJ01000070
158083
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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