This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170680584
LFEF01000152
159476
Alphaproteobacteria
ACG
Arg
>WENV170680600
LFEF01002442
95630
Alphaproteobacteria
GTA
Tyr
>WENV170680599
LFEF01002442
235504
Alphaproteobacteria
TGT
Thr
>WENV170680619
LFEF01003806
23561
Alphaproteobacteria
GGA
Ser
>WENV170680622
LFEF01004026
339884
Alphaproteobacteria
TTC
Glu
>WENV170680626
LFEF01004837
146628
Alphaproteobacteria
ACG
Arg
>WENV170680630
LFEF01005648
144969
Alphaproteobacteria
CGG
Pro
>WENV170680641
LFEF01006335
338274
Alphaproteobacteria
TAC
Val
>WENV170680668
LFEF01008646
413302
Alphaproteobacteria
CCC
Gly
>WENV170680671
LFEF01008706
413626
Alphaproteobacteria
TCC
Gly
>WENV170680678
LFEF01009444
339457
Alphaproteobacteria
>WENV170680683
LFEF01010167
25533
Alphaproteobacteria
GGA
Ser
>WENV170680695
LFEF01011152
25534
Alphaproteobacteria
CGA
Ser
>WENV170680701
LFEF01012010
98423
Alphaproteobacteria
CAA
Leu
>WENV170680704
LFEF01012466
251610
Alphaproteobacteria
TGC
Ala
>WENV170680710
LFEF01012884
23627
Alphaproteobacteria
GGA
Ser
>WENV170680714
LFEF01013432
146926
Alphaproteobacteria
GTG
His
>WENV170680740
LFEF01016314
96322
Alphaproteobacteria
CAA
Leu
>WENV170680749
LFEF01017797
339325
Alphaproteobacteria
CAC
Val
>WENV170680754
LFEF01018267
144972
Alphaproteobacteria
>WENV170680761
LFEF01019472
144964
Alphaproteobacteria
TGG
Pro
>WENV170680763
LFEF01019472
338331
Alphaproteobacteria
>WENV170680764
LFEF01019484
237196
Alphaproteobacteria
CGT
Thr
>WENV170680769
LFEF01019935
95946
Alphaproteobacteria
GTA
Tyr
>WENV170680771
LFEF01019961
23605
Alphaproteobacteria
CGA
Ser
>WENV170680778
LFEF01021149
243630
Alphaproteobacteria
GAA
Phe
>WENV170680777
LFEF01021149
16380
Alphaproteobacteria
GCT
Ser
>WENV170680799
LFEF01023257
251568
Alphaproteobacteria
CCA
Trp
>WENV170680828
LFEF01025247
237571
Alphaproteobacteria
CAT
Met
>WENV170680829
LFEF01025447
10642
Alphaproteobacteria
GCT
Ser
>WENV170680834
LFEF01026130
243630
Alphaproteobacteria
GAA
Phe
>WENV170680843
LFEF01027226
98812
Alphaproteobacteria
CAG
Leu
>WENV170680887
LFEF01030099
24994
Alphaproteobacteria
GGA
Ser
>WENV170680889
LFEF01030368
96061
Alphaproteobacteria
CAA
Leu
>WENV170680892
LFEF01031075
237531
Alphaproteobacteria
CGC
Ala
>WENV170680906
LFEF01033077
144973
Alphaproteobacteria
CCT
Arg
>WENV170680909
LFEF01033553
126988
Alphaproteobacteria
GGG
Pro
>WENV170680912
LFEF01033705
338289
Alphaproteobacteria
GAC
Val
>WENV170680923
LFEF01034723
144978
Alphaproteobacteria
CAT
Met
>WENV170680942
LFEF01036808
23538
Alphaproteobacteria
CGA
Ser
>WENV170680952
LFEF01037958
411642
Alphaproteobacteria
GCA
Cys
>WENV170680951
LFEF01037958
82146
Alphaproteobacteria
TAA
Leu
>WENV170680955
LFEF01038172
146929
Alphaproteobacteria
CCG
Arg
>WENV170680956
LFEF01038491
338282
Alphaproteobacteria
GTT
Asn
>WENV170680958
LFEF01038893
252328
Alphaproteobacteria
TTT
Lys
>WENV170680963
LFEF01039109
339490
Alphaproteobacteria
GAC
Val
>WENV170680989
LFEF01039879
146927
Alphaproteobacteria
TGG
Pro
>WENV170680993
LFEF01040366
411617
Alphaproteobacteria
GCA
Cys
>WENV170680999
LFEF01041166
248021
Alphaproteobacteria
CTT
Lys
>WENV170681004
LFEF01041994
339436
Alphaproteobacteria
>WENV170681008
LFEF01042667
338268
Alphaproteobacteria
GAC
Val
>WENV170681011
LFEF01043119
10729
Alphaproteobacteria
GCT
Ser
>WENV170681022
LFEF01044189
339516
Alphaproteobacteria
CAC
Val
>WENV170681024
LFEF01044376
146848
Alphaproteobacteria
GTG
His
>WENV170681025
LFEF01044398
146626
Alphaproteobacteria
GTG
His
>WENV170681026
LFEF01044631
126988
Alphaproteobacteria
GGG
Pro
>WENV170681029
LFEF01044793
95627
Alphaproteobacteria
CAG
Leu
>WENV170681031
LFEF01044822
147656
Alphaproteobacteria
GAT
Ile
>WENV170681030
LFEF01044822
239083
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK