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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170685445
LFRM01091679
45264
Euryarchaeota
>WENV170688803
LFRM01262421
45264
Euryarchaeota
>WENV170686579
LFRM01152659
238531
Euryarchaeota
GTT
Asn
>WENV170686581
LFRM01152659
238531
Euryarchaeota
GTT
Asn
>WENV170685722
LFRM01105597
366738
Euryarchaeota
GCC
Gly
>WENV170686599
LFRM01153609
366738
Euryarchaeota
GCC
Gly
>WENV170690024
LFRM01322134
366738
Euryarchaeota
GCC
Gly
>WENV170684841
LFRM01060814
147811
Euryarchaeota
GAT
Ile
>WENV170684842
LFRM01060814
147811
Euryarchaeota
GAT
Ile
>WENV170688315
LFRM01239282
80961
Euryarchaeota
TAA
Leu
>WENV170691197
LFRM01384362
80961
Euryarchaeota
TAA
Leu
>WENV170684843
LFRM01060814
339957
Euryarchaeota
GGC
Ala
>WENV170688624
LFRM01253971
147814
Euryarchaeota
TTT
Lys
>WENV170689536
LFRM01299509
147814
Euryarchaeota
TTT
Lys
>WENV170685208
LFRM01078413
45267
Euryarchaeota
GCT
Ser
>WENV170689519
LFRM01298634
45267
Euryarchaeota
GCT
Ser
>WENV170690957
LFRM01372925
147810
Euryarchaeota
CTT
Lys
>WENV170689644
LFRM01305096
147809
Euryarchaeota
TGT
Thr
>WENV170690011
LFRM01321466
147568
Euryarchaeota
GCC
Gly
>WENV170689144
LFRM01279166
47190
Euryarchaeota
>WENV170689145
LFRM01279166
47190
Euryarchaeota
>WENV170690025
LFRM01322134
47190
Euryarchaeota
>WENV170684890
LFRM01063560
127186
Euryarchaeota
>WENV170686158
LFRM01129414
62605
Euryarchaeota
TAG
Leu
>WENV170685716
LFRM01105401
147567
Euryarchaeota
GGC
Ala
>WENV170684927
LFRM01064322
238535
Euryarchaeota
CTG
Gln
>WENV170690150
LFRM01327109
147573
Euryarchaeota
TGC
Ala
>WENV170688963
LFRM01270219
127582
Euryarchaeota
CAT
Met
>WENV170685828
LFRM01110780
128076
Euryarchaeota
GAT
Ile
>WENV170691315
LFRM01392012
238541
Euryarchaeota
GTT
Asn
>WENV170689019
LFRM01272291
238541
Euryarchaeota
GTT
Asn
>WENV170686600
LFRM01153609
182614
Euryarchaeota
TAC
Val
>WENV170689471
LFRM01296106
147815
Euryarchaeota
CAC
Val
>WENV170689642
LFRM01305096
147815
Euryarchaeota
CAC
Val
>WENV170683870
LFRM01008664
339971
Euryarchaeota
GCC
Gly
>WENV170684473
LFRM01041227
339971
Euryarchaeota
GCC
Gly
>WENV170684770
LFRM01057710
339971
Euryarchaeota
GCC
Gly
>WENV170688454
LFRM01246133
339971
Euryarchaeota
GCC
Gly
>WENV170683927
LFRM01010453
47224
Euryarchaeota
GGA
Ser
>WENV170688133
LFRM01229339
47224
Euryarchaeota
GGA
Ser
>WENV170683763
LFRM01002916
348437
Euryarchaeota
GCG
Arg
>WENV170684834
LFRM01060395
339963
Euryarchaeota
CGC
Ala
>WENV170685721
LFRM01105597
339964
Euryarchaeota
GAA
Phe
>WENV170690023
LFRM01322134
339964
Euryarchaeota
GAA
Phe
>WENV170686156
LFRM01129414
147570
Euryarchaeota
CAT
Met
>WENV170684889
LFRM01063560
339960
Euryarchaeota
CCC
Gly
>WENV170684928
LFRM01064322
47032
Euryarchaeota
TAA
Leu
>WENV170687871
LFRM01214605
45262
Euryarchaeota
TAG
Leu
>WENV170690757
LFRM01359875
350749
Euryarchaeota
GCA
Cys
>WENV170685692
LFRM01104515
45256
Euryarchaeota
GCT
Ser
>WENV170689143
LFRM01279166
80999
Euryarchaeota
GGA
Ser
>WENV170686601
LFRM01153609
253779
Euryarchaeota
>WENV170685690
LFRM01104515
127188
Euryarchaeota
TCT
Arg
>WENV170689470
LFRM01296106
411995
Euryarchaeota
TCC
Gly
>WENV170688417
LFRM01243955
123294
Euryarchaeota
TCG
Arg
>WENV170690953
LFRM01372706
358256
Euryarchaeota
>WENV170690954
LFRM01372706
358256
Euryarchaeota
>WENV170686157
LFRM01129414
131584
Euryarchaeota
TTC
Glu
>WENV170686130
LFRM01127944
173325
Euryarchaeota
TTT
Lys
>WENV170686697
LFRM01159554
339959
Euryarchaeota
>WENV170691196
LFRM01384362
238271
Euryarchaeota
GTT
Asn
>WENV170687873
LFRM01214605
127184
Euryarchaeota
CTC
Glu
>WENV170685691
LFRM01104515
127189
Euryarchaeota
CCT
Arg
>WENV170684199
LFRM01025938
133320
Euryarchaeota
>WENV170687869
LFRM01214605
339955
Euryarchaeota
GGT
Thr
>WENV170684835
LFRM01060395
133776
Euryarchaeota
TTC
Glu
>WENV170684836
LFRM01060395
133776
Euryarchaeota
TTC
Glu
>WENV170684200
LFRM01025938
350750
Euryarchaeota
CGT
Thr
>WENV170684749
LFRM01056583
339965
Euryarchaeota
>WENV170691668
LFRM01409766
339962
Euryarchaeota
>WENV170684027
LFRM01015508
339962
Euryarchaeota
>WENV170687870
LFRM01214605
339966
Euryarchaeota
TCC
Gly
>WENV170690759
LFRM01359875
127190
Euryarchaeota
CAT
Met
>WENV170690620
LFRM01352576
238533
Euryarchaeota
TTG
Gln
>WENV170690758
LFRM01359875
238533
Euryarchaeota
TTG
Gln
>WENV170688623
LFRM01253971
45268
Euryarchaeota
CGA
Ser
>WENV170688890
LFRM01266632
45268
Euryarchaeota
CGA
Ser
>WENV170683977
LFRM01013243
339967
Euryarchaeota
GCA
Cys
>WENV170685624
LFRM01102032
339967
Euryarchaeota
GCA
Cys
>WENV170688914
LFRM01268296
59292
Euryarchaeota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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