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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180038887
LLBY010010410
338622
Alphaproteobacteria
GTT
Asn
>WENV180038970
LLBY010016799
385404
Alphaproteobacteria
CTC
Glu
>WENV180039001
LLBY010018804
236134
Alphaproteobacteria
TAC
Val
>WENV180039072
LLBY010024387
365250
Alphaproteobacteria
GCC
Gly
>WENV180039171
LLBY010031803
200119
Alphaproteobacteria
CAT
Met
>WENV180039200
LLBY010036231
236134
Alphaproteobacteria
TAC
Val
>WENV180039203
LLBY010036551
148300
Alphaproteobacteria
CCA
Trp
>WENV180039242
LLBY010041095
184904
Alphaproteobacteria
ACG
Arg
>WENV180039440
LLBY010070671
412259
Alphaproteobacteria
CTG
Gln
>WENV180039458
LLBY010074021
282595
Alphaproteobacteria
CCA
Trp
>WENV180039478
LLBY010077497
173668
Alphaproteobacteria
TCT
Arg
>WENV180039484
LLBY010079768
23572
Alphaproteobacteria
TGA
Ser
>WENV180039550
LLBY010089556
152510
Alphaproteobacteria
GGG
Pro
>WENV180039556
LLBY010091149
23572
Alphaproteobacteria
TGA
Ser
>WENV180039706
LLBY010131934
108283
Alphaproteobacteria
CAA
Leu
>WENV180039712
LLBY010134757
113767
Alphaproteobacteria
>WENV180039998
LLBY010283825
412260
Alphaproteobacteria
TCC
Gly
>WENV180040071
LLBY010365285
173246
Alphaproteobacteria
CCT
Arg
>WENV180040113
LLBY010389691
316120
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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