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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704566
LLEL01000763
381459
Alphaproteobacteria
CAC
Val
>WENV170704622
LLEL01012064
113700
Alphaproteobacteria
>WENV170704551
LLEL01000086
23468
Alphaproteobacteria
GCT
Ser
>WENV170704601
LLEL01007353
338283
Alphaproteobacteria
CAC
Val
>WENV170704599
LLEL01006586
339722
Alphaproteobacteria
TTG
Gln
>WENV170704610
LLEL01009240
339722
Alphaproteobacteria
TTG
Gln
>WENV170704562
LLEL01000495
147334
Alphaproteobacteria
CAT
Met
>WENV170704559
LLEL01000401
150172
Alphaproteobacteria
ACG
Arg
>WENV170704670
LLEL01028840
113716
Alphaproteobacteria
CAA
Leu
>WENV170704649
LLEL01020557
412279
Alphaproteobacteria
CCC
Gly
>WENV170704554
LLEL01000214
28682
Alphaproteobacteria
GGA
Ser
>WENV170704661
LLEL01025976
23672
Alphaproteobacteria
GCT
Ser
>WENV170704557
LLEL01000314
59164
Alphaproteobacteria
GAG
Leu
>WENV170704561
LLEL01000448
163860
Alphaproteobacteria
GGG
Pro
>WENV170704563
LLEL01000571
319925
Alphaproteobacteria
TGT
Thr
>WENV170704565
LLEL01000700
319925
Alphaproteobacteria
TGT
Thr
>WENV170704555
LLEL01000257
339609
Alphaproteobacteria
GGT
Thr
>WENV170704577
LLEL01001914
113715
Alphaproteobacteria
TAG
Leu
>WENV170704648
LLEL01019783
127020
Alphaproteobacteria
TCT
Arg
>WENV170704574
LLEL01001637
236256
Alphaproteobacteria
TAC
Val
>WENV170704683
LLEL01035390
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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