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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705061
LLEP01000005
27709
Alphaproteobacteria
GCT
Ser
>WENV170705068
LLEP01000008
251191
Alphaproteobacteria
TAC
Val
>WENV170705066
LLEP01000008
59164
Alphaproteobacteria
GAG
Leu
>WENV170705075
LLEP01000013
202487
Alphaproteobacteria
CAT
Met
>WENV170705080
LLEP01000030
294405
Alphaproteobacteria
CCA
Trp
>WENV170705083
LLEP01000058
294405
Alphaproteobacteria
CCA
Trp
>WENV170705086
LLEP01000063
59164
Alphaproteobacteria
GAG
Leu
>WENV170705088
LLEP01000074
151730
Alphaproteobacteria
CCG
Arg
>WENV170705090
LLEP01000125
294405
Alphaproteobacteria
CCA
Trp
>WENV170705099
LLEP01000447
59164
Alphaproteobacteria
GAG
Leu
>WENV170705108
LLEP01001656
151730
Alphaproteobacteria
CCG
Arg
>WENV170705112
LLEP01002184
251191
Alphaproteobacteria
TAC
Val
>WENV170705132
LLEP01005108
283763
Alphaproteobacteria
TGC
Ala
>WENV170705154
LLEP01011341
236256
Alphaproteobacteria
TAC
Val
>WENV170705155
LLEP01011860
147089
Alphaproteobacteria
ACG
Arg
>WENV170705157
LLEP01012633
153068
Alphaproteobacteria
CCT
Arg
>WENV170705169
LLEP01015203
23468
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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