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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705480
LNAO01000896
239009
Betaproteobacteria
TAC
Val
>WENV170705491
LNAO01001051
339575
Betaproteobacteria
CAC
Val
>WENV170705508
LNAO01001278
145694
Betaproteobacteria
ACG
Arg
>WENV170705542
LNAO01002103
412167
Betaproteobacteria
GCA
Cys
>WENV170705544
LNAO01002141
412167
Betaproteobacteria
GCA
Cys
>WENV170705549
LNAO01002145
61237
Betaproteobacteria
TAG
Leu
>WENV170705418
LNAO01000260
372150
Betaproteobacteria
CAC
Val
>WENV170705468
LNAO01000776
147332
Betaproteobacteria
CAT
Met
>WENV170705482
LNAO01000930
4627
Betaproteobacteria
GCT
Ser
>WENV170705471
LNAO01000833
293915
Betaproteobacteria
GTT
Asn
>WENV170705472
LNAO01000833
293915
Betaproteobacteria
GTT
Asn
>WENV170705389
LNAO01000032
412422
Betaproteobacteria
GCA
Cys
>WENV170705392
LNAO01000044
162621
Betaproteobacteria
TTG
Gln
>WENV170705460
LNAO01000611
148282
Betaproteobacteria
TGG
Pro
>WENV170705465
LNAO01000676
162620
Betaproteobacteria
ACG
Arg
>WENV170705502
LNAO01001148
109389
Betaproteobacteria
TAG
Leu
>WENV170705511
LNAO01001409
23608
Betaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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