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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170716908
LSQX01016305
267870
Betaproteobacteria
TTC
Glu
>WENV170725780
LSQX01356203
350498
Betaproteobacteria
CCT
Arg
>WENV170726150
LSQX01369038
18413
Betaproteobacteria
TGA
Ser
>WENV170722786
LSQX01242973
290456
Betaproteobacteria
GTT
Asn
>WENV170722787
LSQX01242973
290456
Betaproteobacteria
GTT
Asn
>WENV170717196
LSQX01027435
83698
Betaproteobacteria
GTA
Tyr
>WENV170720214
LSQX01145232
83698
Betaproteobacteria
GTA
Tyr
>WENV170724568
LSQX01309980
83698
Betaproteobacteria
GTA
Tyr
>WENV170726639
LSQX01388402
83698
Betaproteobacteria
GTA
Tyr
>WENV170720454
LSQX01153586
266774
Betaproteobacteria
TGT
Thr
>WENV170720878
LSQX01170115
266774
Betaproteobacteria
TGT
Thr
>WENV170718972
LSQX01097105
198281
Betaproteobacteria
GAT
Ile
>WENV170719714
LSQX01124109
198281
Betaproteobacteria
GAT
Ile
>WENV170723298
LSQX01263399
198281
Betaproteobacteria
GAT
Ile
>WENV170726387
LSQX01378261
198281
Betaproteobacteria
GAT
Ile
>WENV170726570
LSQX01386166
198281
Betaproteobacteria
GAT
Ile
>WENV170717799
LSQX01050003
133820
Betaproteobacteria
ACG
Arg
>WENV170717800
LSQX01050003
133820
Betaproteobacteria
ACG
Arg
>WENV170718459
LSQX01076671
133820
Betaproteobacteria
ACG
Arg
>WENV170720168
LSQX01143716
133820
Betaproteobacteria
ACG
Arg
>WENV170720498
LSQX01155490
133820
Betaproteobacteria
ACG
Arg
>WENV170721570
LSQX01195375
133820
Betaproteobacteria
ACG
Arg
>WENV170722180
LSQX01219880
133820
Betaproteobacteria
ACG
Arg
>WENV170724908
LSQX01323214
133820
Betaproteobacteria
ACG
Arg
>WENV170724949
LSQX01324600
133820
Betaproteobacteria
ACG
Arg
>WENV170726859
LSQX01396425
133820
Betaproteobacteria
ACG
Arg
>WENV170719304
LSQX01109696
173170
Betaproteobacteria
CAT
Met
>WENV170720167
LSQX01143716
173170
Betaproteobacteria
CAT
Met
>WENV170721569
LSQX01195375
173170
Betaproteobacteria
CAT
Met
>WENV170722179
LSQX01219880
173170
Betaproteobacteria
CAT
Met
>WENV170726858
LSQX01396425
173170
Betaproteobacteria
CAT
Met
>WENV170721859
LSQX01206574
47649
Betaproteobacteria
TAA
Leu
>WENV170717798
LSQX01050003
6969
Betaproteobacteria
GCT
Ser
>WENV170726578
LSQX01386590
146760
Betaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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