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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170728307
LULE01018738
113700
Alphaproteobacteria
>WENV170728407
LULE01028458
339723
Alphaproteobacteria
>WENV170728097
LULE01009039
339454
Alphaproteobacteria
>WENV170727353
LULE01000003
339606
Alphaproteobacteria
>WENV170728345
LULE01022240
147089
Alphaproteobacteria
ACG
Arg
>WENV170727413
LULE01000048
147152
Alphaproteobacteria
ACG
Arg
>WENV170727351
LULE01000003
148083
Alphaproteobacteria
ACG
Arg
>WENV170727334
LULE01000002
381459
Alphaproteobacteria
CAC
Val
>WENV170728333
LULE01020872
381459
Alphaproteobacteria
CAC
Val
>WENV170727345
LULE01000002
144891
Alphaproteobacteria
CAT
Met
>WENV170727315
LULE01000001
237489
Alphaproteobacteria
CAT
Met
>WENV170728453
LULE01032354
165266
Alphaproteobacteria
CAT
Met
>WENV170727311
LULE01000001
167926
Alphaproteobacteria
CAT
Met
>WENV170727382
LULE01000012
237493
Alphaproteobacteria
CCA
Trp
>WENV170727460
LULE01000123
282595
Alphaproteobacteria
CCA
Trp
>WENV170727813
LULE01002627
282595
Alphaproteobacteria
CCA
Trp
>WENV170728234
LULE01014349
282595
Alphaproteobacteria
CCA
Trp
>WENV170728275
LULE01016800
241518
Alphaproteobacteria
CCA
Trp
>WENV170728389
LULE01026845
241518
Alphaproteobacteria
CCA
Trp
>WENV170727318
LULE01000001
191695
Alphaproteobacteria
CCT
Arg
>WENV170727308
LULE01000001
258175
Alphaproteobacteria
CGC
Ala
>WENV170727379
LULE01000010
237196
Alphaproteobacteria
CGT
Thr
>WENV170727701
LULE01001370
385404
Alphaproteobacteria
CTC
Glu
>WENV170727394
LULE01000022
412259
Alphaproteobacteria
CTG
Gln
>WENV170727359
LULE01000004
412798
Alphaproteobacteria
CTG
Gln
>WENV170727370
LULE01000006
338760
Alphaproteobacteria
GAA
Phe
>WENV170728324
LULE01020162
339846
Alphaproteobacteria
GAC
Val
>WENV170728011
LULE01006731
359842
Alphaproteobacteria
GAC
Val
>WENV170727372
LULE01000006
59164
Alphaproteobacteria
GAG
Leu
>WENV170727850
LULE01003121
195945
Alphaproteobacteria
GAT
Ile
>WENV170727386
LULE01000012
377327
Alphaproteobacteria
GCC
Gly
>WENV170727369
LULE01000006
23468
Alphaproteobacteria
GCT
Ser
>WENV170728412
LULE01029257
23468
Alphaproteobacteria
GCT
Ser
>WENV170727332
LULE01000002
23561
Alphaproteobacteria
GGA
Ser
>WENV170727363
LULE01000004
21074
Alphaproteobacteria
GGA
Ser
>WENV170728300
LULE01018265
147361
Alphaproteobacteria
GGG
Pro
>WENV170727368
LULE01000006
339290
Alphaproteobacteria
GGT
Thr
>WENV170727373
LULE01000007
369678
Alphaproteobacteria
GGT
Thr
>WENV170728133
LULE01010044
369678
Alphaproteobacteria
GGT
Thr
>WENV170727313
LULE01000001
159305
Alphaproteobacteria
GTC
Asp
>WENV170727940
LULE01004865
146757
Alphaproteobacteria
GTG
His
>WENV170727341
LULE01000002
199551
Alphaproteobacteria
GTG
His
>WENV170727346
LULE01000002
338282
Alphaproteobacteria
GTT
Asn
>WENV170727437
LULE01000083
59202
Alphaproteobacteria
TAA
Leu
>WENV170727360
LULE01000004
95928
Alphaproteobacteria
TAG
Leu
>WENV170727404
LULE01000041
95928
Alphaproteobacteria
TAG
Leu
>WENV170727342
LULE01000002
113715
Alphaproteobacteria
TAG
Leu
>WENV170727374
LULE01000007
412917
Alphaproteobacteria
TCC
Gly
>WENV170727403
LULE01000041
412260
Alphaproteobacteria
TCC
Gly
>WENV170728055
LULE01007652
412424
Alphaproteobacteria
TCC
Gly
>WENV170727567
LULE01000494
31506
Alphaproteobacteria
TGA
Ser
>WENV170727319
LULE01000001
29831
Alphaproteobacteria
TGA
Ser
>WENV170727331
LULE01000002
281594
Alphaproteobacteria
TGT
Thr
>WENV170728270
LULE01016474
238045
Alphaproteobacteria
TTC
Glu
>WENV170728238
LULE01014552
339724
Alphaproteobacteria
TTG
Gln
>WENV170727671
LULE01001085
339722
Alphaproteobacteria
TTG
Gln
>WENV170727402
LULE01000040
339639
Alphaproteobacteria
TTG
Gln
>WENV170727380
LULE01000010
237740
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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