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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170730459
LULH01000003
167926
Alphaproteobacteria
CAT
Met
>WENV170730462
LULH01000010
191695
Alphaproteobacteria
CCT
Arg
>WENV170730465
LULH01000012
29831
Alphaproteobacteria
TGA
Ser
>WENV170730489
LULH01000061
95928
Alphaproteobacteria
TAG
Leu
>WENV170730491
LULH01000067
412917
Alphaproteobacteria
TCC
Gly
>WENV170730504
LULH01000096
237493
Alphaproteobacteria
CCA
Trp
>WENV170730509
LULH01000101
21074
Alphaproteobacteria
GGA
Ser
>WENV170730514
LULH01000123
159305
Alphaproteobacteria
GTC
Asp
>WENV170730520
LULH01000142
377327
Alphaproteobacteria
GCC
Gly
>WENV170730521
LULH01000147
74116
Alphaproteobacteria
CAG
Leu
>WENV170730546
LULH01000265
258175
Alphaproteobacteria
CGC
Ala
>WENV170730551
LULH01000293
237489
Alphaproteobacteria
CAT
Met
>WENV170730568
LULH01000352
369678
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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