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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170732923
LULJ01002185
412259
Alphaproteobacteria
CTG
Gln
>WENV170732790
LULJ01001114
237493
Alphaproteobacteria
CCA
Trp
>WENV170732799
LULJ01001186
412917
Alphaproteobacteria
TCC
Gly
>WENV170732463
LULJ01000023
147152
Alphaproteobacteria
ACG
Arg
>WENV170732976
LULJ01002938
159305
Alphaproteobacteria
GTC
Asp
>WENV170733401
LULJ01017032
23468
Alphaproteobacteria
GCT
Ser
>WENV170732873
LULJ01001743
282595
Alphaproteobacteria
CCA
Trp
>WENV170733614
LULJ01036139
282595
Alphaproteobacteria
CCA
Trp
>WENV170732977
LULJ01002942
435528
Alphaproteobacteria
GCA
Cys
>WENV170732577
LULJ01000137
237197
Alphaproteobacteria
CCA
Trp
>WENV170732470
LULJ01000026
95928
Alphaproteobacteria
TAG
Leu
>WENV170732481
LULJ01000026
412260
Alphaproteobacteria
TCC
Gly
>WENV170732896
LULJ01001956
258175
Alphaproteobacteria
CGC
Ala
>WENV170732821
LULJ01001359
167926
Alphaproteobacteria
CAT
Met
>WENV170733535
LULJ01026271
167926
Alphaproteobacteria
CAT
Met
>WENV170733067
LULJ01004302
161002
Alphaproteobacteria
GTG
His
>WENV170733257
LULJ01010149
242540
Alphaproteobacteria
TGC
Ala
>WENV170733306
LULJ01011675
241518
Alphaproteobacteria
CCA
Trp
>WENV170732752
LULJ01000822
319925
Alphaproteobacteria
TGT
Thr
>WENV170732767
LULJ01000947
369678
Alphaproteobacteria
GGT
Thr
>WENV170733124
LULJ01005773
369678
Alphaproteobacteria
GGT
Thr
>WENV170733622
LULJ01037566
146926
Alphaproteobacteria
GTG
His
>WENV170732941
LULJ01002492
29831
Alphaproteobacteria
TGA
Ser
>WENV170732842
LULJ01001477
412424
Alphaproteobacteria
TCC
Gly
>WENV170732983
LULJ01003064
21074
Alphaproteobacteria
GGA
Ser
>WENV170732808
LULJ01001259
377327
Alphaproteobacteria
GCC
Gly
>WENV170732542
LULJ01000088
59202
Alphaproteobacteria
TAA
Leu
>WENV170732943
LULJ01002503
191695
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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