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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170733023
LULJ01003524
237895
Gammaproteobacteria
CCG
Arg
>WENV170733462
LULJ01020841
244202
Gammaproteobacteria
TTT
Lys
>WENV170732494
LULJ01000039
240642
Gammaproteobacteria
GTT
Asn
>WENV170732654
LULJ01000381
240642
Gammaproteobacteria
GTT
Asn
>WENV170732575
LULJ01000132
322642
Gammaproteobacteria
GGT
Thr
>WENV170732639
LULJ01000317
322642
Gammaproteobacteria
GGT
Thr
>WENV170732946
LULJ01002552
309243
Gammaproteobacteria
GTT
Asn
>WENV170733322
LULJ01012351
80625
Gammaproteobacteria
TAA
Leu
>WENV170732658
LULJ01000399
190809
Gammaproteobacteria
GGG
Pro
>WENV170733568
LULJ01029275
73305
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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