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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170735462
LULL01002155
82652
Alphaproteobacteria
GTA
Tyr
>WENV170735491
LULL01002692
24760
Alphaproteobacteria
TGA
Ser
>WENV170735542
LULL01003756
412917
Alphaproteobacteria
TCC
Gly
>WENV170735557
LULL01004006
237740
Alphaproteobacteria
TTT
Lys
>WENV170735563
LULL01004205
339639
Alphaproteobacteria
TTG
Gln
>WENV170735579
LULL01004537
342905
Alphaproteobacteria
GGT
Thr
>WENV170735583
LULL01004645
237489
Alphaproteobacteria
CAT
Met
>WENV170735649
LULL01007024
159305
Alphaproteobacteria
GTC
Asp
>WENV170735658
LULL01007227
412259
Alphaproteobacteria
CTG
Gln
>WENV170735664
LULL01007438
65244
Alphaproteobacteria
CAG
Leu
>WENV170735670
LULL01007655
412798
Alphaproteobacteria
CTG
Gln
>WENV170735705
LULL01008601
338269
Alphaproteobacteria
GTT
Asn
>WENV170735710
LULL01008743
364533
Alphaproteobacteria
GCC
Gly
>WENV170735718
LULL01009148
349650
Alphaproteobacteria
CAC
Val
>WENV170735732
LULL01009999
95925
Alphaproteobacteria
CAA
Leu
>WENV170735738
LULL01010486
163860
Alphaproteobacteria
GGG
Pro
>WENV170735770
LULL01012048
23468
Alphaproteobacteria
GCT
Ser
>WENV170735802
LULL01013511
238608
Alphaproteobacteria
CAT
Met
>WENV170735856
LULL01017622
95928
Alphaproteobacteria
TAG
Leu
>WENV170735860
LULL01017873
147876
Alphaproteobacteria
TCT
Arg
>WENV170735880
LULL01018869
95928
Alphaproteobacteria
TAG
Leu
>WENV170735885
LULL01019219
147879
Alphaproteobacteria
TGG
Pro
>WENV170735923
LULL01022986
147289
Alphaproteobacteria
GTC
Asp
>WENV170736049
LULL01034824
255832
Alphaproteobacteria
CGC
Ala
>WENV170736050
LULL01034905
241021
Alphaproteobacteria
GGC
Ala
>WENV170736061
LULL01036882
237197
Alphaproteobacteria
CCA
Trp
>WENV170736062
LULL01036949
147152
Alphaproteobacteria
ACG
Arg
>WENV170736090
LULL01041282
252148
Alphaproteobacteria
TGT
Thr
>WENV170736110
LULL01044684
113715
Alphaproteobacteria
TAG
Leu
>WENV170736121
LULL01046804
27877
Alphaproteobacteria
GGA
Ser
>WENV170736141
LULL01051053
147089
Alphaproteobacteria
ACG
Arg
>WENV170736152
LULL01054006
127020
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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