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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170739194
LULQ01000001
237489
Alphaproteobacteria
CAT
Met
>WENV170739192
LULQ01000001
159305
Alphaproteobacteria
GTC
Asp
>WENV170739187
LULQ01000001
258175
Alphaproteobacteria
CGC
Ala
>WENV170739190
LULQ01000001
167926
Alphaproteobacteria
CAT
Met
>WENV170739198
LULQ01000001
29831
Alphaproteobacteria
TGA
Ser
>WENV170739197
LULQ01000001
191695
Alphaproteobacteria
CCT
Arg
>WENV170739212
LULQ01000002
95928
Alphaproteobacteria
TAG
Leu
>WENV170739215
LULQ01000002
21074
Alphaproteobacteria
GGA
Ser
>WENV170739217
LULQ01000003
412917
Alphaproteobacteria
TCC
Gly
>WENV170739216
LULQ01000003
369678
Alphaproteobacteria
GGT
Thr
>WENV170739222
LULQ01000007
237493
Alphaproteobacteria
CCA
Trp
>WENV170739226
LULQ01000007
377327
Alphaproteobacteria
GCC
Gly
>WENV170739231
LULQ01000011
435870
Alphaproteobacteria
GCA
Cys
>WENV170739238
LULQ01000031
339606
Alphaproteobacteria
>WENV170739244
LULQ01000042
339290
Alphaproteobacteria
GGT
Thr
>WENV170739243
LULQ01000042
338760
Alphaproteobacteria
GAA
Phe
>WENV170739247
LULQ01000045
148083
Alphaproteobacteria
ACG
Arg
>WENV170739249
LULQ01000049
59164
Alphaproteobacteria
GAG
Leu
>WENV170739251
LULQ01000052
237740
Alphaproteobacteria
TTT
Lys
>WENV170739250
LULQ01000052
237196
Alphaproteobacteria
CGT
Thr
>WENV170739264
LULQ01000073
148265
Alphaproteobacteria
CCT
Arg
>WENV170739265
LULQ01000074
199551
Alphaproteobacteria
GTG
His
>WENV170739272
LULQ01000080
381459
Alphaproteobacteria
CAC
Val
>WENV170739270
LULQ01000080
23561
Alphaproteobacteria
GGA
Ser
>WENV170739277
LULQ01000092
281594
Alphaproteobacteria
TGT
Thr
>WENV170739315
LULQ01000200
23468
Alphaproteobacteria
GCT
Ser
>WENV170739326
LULQ01000271
113715
Alphaproteobacteria
TAG
Leu
>WENV170739338
LULQ01000308
282595
Alphaproteobacteria
CCA
Trp
>WENV170739348
LULQ01000362
144891
Alphaproteobacteria
CAT
Met
>WENV170739349
LULQ01000362
338282
Alphaproteobacteria
GTT
Asn
>WENV170739431
LULQ01001268
237197
Alphaproteobacteria
CCA
Trp
>WENV170739528
LULQ01002800
195945
Alphaproteobacteria
GAT
Ile
>WENV170739614
LULQ01005194
435528
Alphaproteobacteria
GCA
Cys
>WENV170739630
LULQ01005732
412259
Alphaproteobacteria
CTG
Gln
>WENV170739707
LULQ01009178
412260
Alphaproteobacteria
TCC
Gly
>WENV170739736
LULQ01010821
23468
Alphaproteobacteria
GCT
Ser
>WENV170739788
LULQ01014743
412424
Alphaproteobacteria
TCC
Gly
>WENV170739796
LULQ01015227
161002
Alphaproteobacteria
GTG
His
>WENV170739878
LULQ01025130
242540
Alphaproteobacteria
TGC
Ala
>WENV170739897
LULQ01028323
147152
Alphaproteobacteria
ACG
Arg
>WENV170739904
LULQ01030103
282595
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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