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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170751949
LUMI01018511
267922
Alphaproteobacteria
CCA
Trp
>WENV170751184
LUMI01000023
113700
Alphaproteobacteria
>WENV170751330
LUMI01000430
23468
Alphaproteobacteria
GCT
Ser
>WENV170751761
LUMI01007923
176908
Alphaproteobacteria
GTC
Asp
>WENV170751979
LUMI01021139
176908
Alphaproteobacteria
GTC
Asp
>WENV170751791
LUMI01008776
23561
Alphaproteobacteria
GGA
Ser
>WENV170752028
LUMI01026071
338282
Alphaproteobacteria
GTT
Asn
>WENV170751793
LUMI01009034
339454
Alphaproteobacteria
>WENV170752021
LUMI01025312
345376
Alphaproteobacteria
GAC
Val
>WENV170751177
LUMI01000018
339722
Alphaproteobacteria
TTG
Gln
>WENV170751519
LUMI01001987
252148
Alphaproteobacteria
TGT
Thr
>WENV170752008
LUMI01023907
167926
Alphaproteobacteria
CAT
Met
>WENV170751185
LUMI01000023
161002
Alphaproteobacteria
GTG
His
>WENV170751884
LUMI01014260
161002
Alphaproteobacteria
GTG
His
>WENV170751593
LUMI01003179
242540
Alphaproteobacteria
TGC
Ala
>WENV170751299
LUMI01000329
359842
Alphaproteobacteria
GAC
Val
>WENV170751758
LUMI01007895
359842
Alphaproteobacteria
GAC
Val
>WENV170751736
LUMI01006950
348781
Alphaproteobacteria
GAA
Phe
>WENV170751196
LUMI01000031
163860
Alphaproteobacteria
GGG
Pro
>WENV170751577
LUMI01002838
163860
Alphaproteobacteria
GGG
Pro
>WENV170751357
LUMI01000549
268365
Alphaproteobacteria
CCA
Trp
>WENV170752030
LUMI01026169
268365
Alphaproteobacteria
CCA
Trp
>WENV170751186
LUMI01000023
412424
Alphaproteobacteria
TCC
Gly
>WENV170751361
LUMI01000555
412424
Alphaproteobacteria
TCC
Gly
>WENV170751868
LUMI01013389
150356
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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