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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170751206
LUMI01000048
260238
Gammaproteobacteria
>WENV170751211
LUMI01000057
240642
Gammaproteobacteria
GTT
Asn
>WENV170751329
LUMI01000410
238510
Gammaproteobacteria
GCC
Gly
>WENV170751490
LUMI01001628
149036
Gammaproteobacteria
CCA
Trp
>WENV170751493
LUMI01001635
236480
Gammaproteobacteria
GTG
His
>WENV170751492
LUMI01001635
173648
Gammaproteobacteria
TCT
Arg
>WENV170751491
LUMI01001635
149038
Gammaproteobacteria
TGG
Pro
>WENV170751495
LUMI01001635
149038
Gammaproteobacteria
TGG
Pro
>WENV170751502
LUMI01001757
278046
Gammaproteobacteria
TGT
Thr
>WENV170751514
LUMI01001919
145260
Gammaproteobacteria
CAT
Met
>WENV170751515
LUMI01001919
97031
Gammaproteobacteria
TAG
Leu
>WENV170751518
LUMI01001969
147053
Gammaproteobacteria
GTT
Asn
>WENV170751555
LUMI01002486
149035
Gammaproteobacteria
CCG
Arg
>WENV170751578
LUMI01002897
340801
Gammaproteobacteria
CCT
Arg
>WENV170751666
LUMI01004794
238510
Gammaproteobacteria
GCC
Gly
>WENV170751783
LUMI01008622
160030
Gammaproteobacteria
GGG
Pro
>WENV170751876
LUMI01013764
278046
Gammaproteobacteria
TGT
Thr
>WENV170751879
LUMI01013764
240084
Gammaproteobacteria
GGT
Thr
>WENV170751971
LUMI01020418
59830
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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