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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170755225
LUMM01029645
185163
Gammaproteobacteria
ACG
Arg
>WENV170754995
LUMM01008344
59830
Gammaproteobacteria
CAA
Leu
>WENV170755089
LUMM01014538
145261
Gammaproteobacteria
CAT
Met
>WENV170754962
LUMM01006529
149036
Gammaproteobacteria
CCA
Trp
>WENV170754990
LUMM01008164
149035
Gammaproteobacteria
CCG
Arg
>WENV170755078
LUMM01013517
340801
Gammaproteobacteria
CCT
Arg
>WENV170754812
LUMM01001360
240084
Gammaproteobacteria
GGT
Thr
>WENV170755195
LUMM01025282
236480
Gammaproteobacteria
GTG
His
>WENV170755054
LUMM01011894
147053
Gammaproteobacteria
GTT
Asn
>WENV170754893
LUMM01003876
97031
Gammaproteobacteria
TAG
Leu
>WENV170755196
LUMM01025282
97031
Gammaproteobacteria
TAG
Leu
>WENV170755197
LUMM01025282
149038
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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