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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170761359
LUMV01000053
255832
Alphaproteobacteria
CGC
Ala
>WENV170761365
LUMV01000060
338269
Alphaproteobacteria
GTT
Asn
>WENV170761369
LUMV01000078
82652
Alphaproteobacteria
GTA
Tyr
>WENV170761370
LUMV01000086
254294
Alphaproteobacteria
>WENV170761372
LUMV01000089
59202
Alphaproteobacteria
TAA
Leu
>WENV170761392
LUMV01000185
342905
Alphaproteobacteria
GGT
Thr
>WENV170761395
LUMV01000189
24760
Alphaproteobacteria
TGA
Ser
>WENV170761397
LUMV01000200
236004
Alphaproteobacteria
TTT
Lys
>WENV170761399
LUMV01000202
412260
Alphaproteobacteria
TCC
Gly
>WENV170761400
LUMV01000205
339724
Alphaproteobacteria
TTG
Gln
>WENV170761401
LUMV01000206
339639
Alphaproteobacteria
TTG
Gln
>WENV170761404
LUMV01000215
243837
Alphaproteobacteria
CGT
Thr
>WENV170761421
LUMV01000304
147152
Alphaproteobacteria
ACG
Arg
>WENV170761432
LUMV01000348
95925
Alphaproteobacteria
CAA
Leu
>WENV170761433
LUMV01000353
237489
Alphaproteobacteria
CAT
Met
>WENV170761436
LUMV01000369
237197
Alphaproteobacteria
CCA
Trp
>WENV170761445
LUMV01000404
339724
Alphaproteobacteria
TTG
Gln
>WENV170761449
LUMV01000413
254294
Alphaproteobacteria
>WENV170761451
LUMV01000430
412917
Alphaproteobacteria
TCC
Gly
>WENV170761455
LUMV01000449
10665
Alphaproteobacteria
GCT
Ser
>WENV170761466
LUMV01000477
162801
Alphaproteobacteria
GTG
His
>WENV170761472
LUMV01000511
151730
Alphaproteobacteria
CCG
Arg
>WENV170761475
LUMV01000539
412259
Alphaproteobacteria
CTG
Gln
>WENV170761480
LUMV01000553
95928
Alphaproteobacteria
TAG
Leu
>WENV170761484
LUMV01000570
147289
Alphaproteobacteria
GTC
Asp
>WENV170761489
LUMV01000592
159305
Alphaproteobacteria
GTC
Asp
>WENV170761493
LUMV01000623
16408
Alphaproteobacteria
GGA
Ser
>WENV170761494
LUMV01000626
243803
Alphaproteobacteria
CAT
Met
>WENV170761496
LUMV01000632
95928
Alphaproteobacteria
TAG
Leu
>WENV170761515
LUMV01000794
82652
Alphaproteobacteria
GTA
Tyr
>WENV170761519
LUMV01000859
237493
Alphaproteobacteria
CCA
Trp
>WENV170761527
LUMV01000956
236004
Alphaproteobacteria
TTT
Lys
>WENV170761539
LUMV01001144
236004
Alphaproteobacteria
TTT
Lys
>WENV170761552
LUMV01001342
412798
Alphaproteobacteria
CTG
Gln
>WENV170761559
LUMV01001468
152510
Alphaproteobacteria
GGG
Pro
>WENV170761578
LUMV01001733
95928
Alphaproteobacteria
TAG
Leu
>WENV170761587
LUMV01001968
249907
Alphaproteobacteria
CGC
Ala
>WENV170761591
LUMV01002024
412281
Alphaproteobacteria
CTG
Gln
>WENV170761660
LUMV01006130
339725
Alphaproteobacteria
GAA
Phe
>WENV170761705
LUMV01011210
160158
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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