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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170762060
LUMW01000630
95750
Gammaproteobacteria
TAG
Leu
>WENV170762081
LUMW01000772
243407
Gammaproteobacteria
TTT
Lys
>WENV170762145
LUMW01001305
411842
Gammaproteobacteria
GCA
Cys
>WENV170762256
LUMW01003421
247974
Gammaproteobacteria
CCA
Trp
>WENV170762279
LUMW01003952
152301
Gammaproteobacteria
GAT
Ile
>WENV170762338
LUMW01005695
283668
Gammaproteobacteria
TTT
Lys
>WENV170762374
LUMW01006628
80625
Gammaproteobacteria
TAA
Leu
>WENV170762500
LUMW01012003
174801
Gammaproteobacteria
TGG
Pro
>WENV170762546
LUMW01014246
98737
Gammaproteobacteria
GAG
Leu
>WENV170762558
LUMW01014613
411735
Gammaproteobacteria
GCA
Cys
>WENV170762679
LUMW01025249
240619
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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