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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170780340
MAAA01029165
146646
Gammaproteobacteria
TGG
Pro
>WENV170780338
MAAA01029100
149065
Gammaproteobacteria
CCA
Trp
>WENV170780012
MAAA01008515
115067
Gammaproteobacteria
GTA
Tyr
>WENV170780330
MAAA01028700
238438
Gammaproteobacteria
>WENV170780161
MAAA01018033
249887
Gammaproteobacteria
GGT
Thr
>WENV170780331
MAAA01028787
237225
Gammaproteobacteria
GCC
Gly
>WENV170779979
MAAA01005172
236013
Gammaproteobacteria
TGC
Ala
>WENV170779992
MAAA01007120
236013
Gammaproteobacteria
TGC
Ala
>WENV170780325
MAAA01028477
95866
Gammaproteobacteria
GTA
Tyr
>WENV170780346
MAAA01029571
95866
Gammaproteobacteria
GTA
Tyr
>WENV170780062
MAAA01011242
45345
Gammaproteobacteria
GGA
Ser
>WENV170780262
MAAA01025571
45345
Gammaproteobacteria
GGA
Ser
>WENV170780263
MAAA01025586
45345
Gammaproteobacteria
GGA
Ser
>WENV170780265
MAAA01025649
45345
Gammaproteobacteria
GGA
Ser
>WENV170780286
MAAA01027307
45345
Gammaproteobacteria
GGA
Ser
>WENV170780329
MAAA01028700
237221
Gammaproteobacteria
GGC
Ala
>WENV170780333
MAAA01028787
95870
Gammaproteobacteria
TAA
Leu
>WENV170780219
MAAA01021722
293820
Gammaproteobacteria
TTT
Lys
>WENV170780023
MAAA01009312
293820
Gammaproteobacteria
TTT
Lys
>WENV170780218
MAAA01021721
293820
Gammaproteobacteria
TTT
Lys
>WENV170779971
MAAA01004884
193275
Gammaproteobacteria
GAT
Ile
>WENV170780336
MAAA01029006
146642
Gammaproteobacteria
CCA
Trp
>WENV170780339
MAAA01029165
268904
Gammaproteobacteria
GTG
His
>WENV170780337
MAAA01029067
237223
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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