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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784073
MCHG01000005
165250
Alphaproteobacteria
TGG
Pro
>WENV170784161
MCHG01000057
146819
Alphaproteobacteria
TTT
Lys
>WENV170784063
MCHG01000005
350475
Alphaproteobacteria
GGT
Thr
>WENV170784068
MCHG01000005
114616
Alphaproteobacteria
GTA
Tyr
>WENV170784150
MCHG01000044
146818
Alphaproteobacteria
CAT
Met
>WENV170784075
MCHG01000005
153154
Alphaproteobacteria
TAC
Val
>WENV170784061
MCHG01000005
339432
Alphaproteobacteria
GTT
Asn
>WENV170784151
MCHG01000044
341164
Alphaproteobacteria
GCC
Gly
>WENV170784074
MCHG01000005
10642
Alphaproteobacteria
GCT
Ser
>WENV170784069
MCHG01000005
424918
Alphaproteobacteria
TCC
Gly
>WENV170784067
MCHG01000005
152773
Alphaproteobacteria
GTG
His
>WENV170784125
MCHG01000022
257056
Alphaproteobacteria
CGT
Thr
>WENV170784286
MCHG01000437
25307
Alphaproteobacteria
GGA
Ser
>WENV170784091
MCHG01000012
339436
Alphaproteobacteria
>WENV170784131
MCHG01000030
339436
Alphaproteobacteria
>WENV170784103
MCHG01000016
25738
Alphaproteobacteria
TGA
Ser
>WENV170784090
MCHG01000011
237439
Alphaproteobacteria
CTT
Lys
>WENV170784124
MCHG01000022
238639
Alphaproteobacteria
CGC
Ala
>WENV170784062
MCHG01000005
237574
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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