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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784592
MCNE01003081
411593
Gammaproteobacteria
CCC
Gly
>WENV170784535
MCNE01000133
235837
Gammaproteobacteria
GTT
Asn
>WENV170784591
MCNE01002975
23626
Gammaproteobacteria
TGA
Ser
>WENV170784515
MCNE01000015
26165
Gammaproteobacteria
GGA
Ser
>WENV170784545
MCNE01000228
45178
Gammaproteobacteria
TGA
Ser
>WENV170784527
MCNE01000071
188516
Gammaproteobacteria
CAT
Met
>WENV170784518
MCNE01000019
58812
Gammaproteobacteria
TAA
Leu
>WENV170784556
MCNE01000691
279763
Gammaproteobacteria
TGT
Thr
>WENV170784581
MCNE01001718
238674
Gammaproteobacteria
TGT
Thr
>WENV170784530
MCNE01000072
145335
Gammaproteobacteria
GGG
Pro
>WENV170784525
MCNE01000047
269152
Gammaproteobacteria
GTG
His
>WENV170784512
MCNE01000006
411725
Gammaproteobacteria
CCC
Gly
>WENV170784511
MCNE01000003
145334
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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