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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784612
MCNF01000014
26165
Gammaproteobacteria
GGA
Ser
>WENV170784614
MCNF01000022
58812
Gammaproteobacteria
TAA
Leu
>WENV170784617
MCNF01000042
411725
Gammaproteobacteria
CCC
Gly
>WENV170784622
MCNF01000096
145335
Gammaproteobacteria
GGG
Pro
>WENV170784625
MCNF01000123
145334
Gammaproteobacteria
CCG
Arg
>WENV170784639
MCNF01000224
239650
Gammaproteobacteria
TGT
Thr
>WENV170784643
MCNF01000285
235837
Gammaproteobacteria
GTT
Asn
>WENV170784645
MCNF01000355
45178
Gammaproteobacteria
TGA
Ser
>WENV170784657
MCNF01000697
23626
Gammaproteobacteria
TGA
Ser
>WENV170784665
MCNF01001153
95633
Gammaproteobacteria
GTA
Tyr
>WENV170784675
MCNF01001925
156545
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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