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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170812339
MDSW01181795
238010
Alphaproteobacteria
TTT
Lys
>WENV170803780
MDSW01035568
381459
Alphaproteobacteria
CAC
Val
>WENV170803058
MDSW01024142
365250
Alphaproteobacteria
GCC
Gly
>WENV170812316
MDSW01181422
365250
Alphaproteobacteria
GCC
Gly
>WENV170814701
MDSW01221588
365250
Alphaproteobacteria
GCC
Gly
>WENV170809517
MDSW01133571
148200
Alphaproteobacteria
TGG
Pro
>WENV170802837
MDSW01020162
351461
Alphaproteobacteria
TTG
Gln
>WENV170805889
MDSW01072556
149985
Alphaproteobacteria
ACG
Arg
>WENV170807728
MDSW01103394
149985
Alphaproteobacteria
ACG
Arg
>WENV170807832
MDSW01105091
251191
Alphaproteobacteria
TAC
Val
>WENV170809033
MDSW01125092
251191
Alphaproteobacteria
TAC
Val
>WENV170804198
MDSW01043208
146757
Alphaproteobacteria
GTG
His
>WENV170807525
MDSW01100063
99726
Alphaproteobacteria
TAG
Leu
>WENV170810840
MDSW01155911
300133
Alphaproteobacteria
TAC
Val
>WENV170810074
MDSW01142905
144891
Alphaproteobacteria
CAT
Met
>WENV170804785
MDSW01053029
306070
Alphaproteobacteria
CCA
Trp
>WENV170805611
MDSW01067559
306070
Alphaproteobacteria
CCA
Trp
>WENV170809754
MDSW01137605
306070
Alphaproteobacteria
CCA
Trp
>WENV170803455
MDSW01030124
147089
Alphaproteobacteria
ACG
Arg
>WENV170809671
MDSW01136228
203131
Alphaproteobacteria
CCG
Arg
>WENV170802972
MDSW01022685
267922
Alphaproteobacteria
CCA
Trp
>WENV170811242
MDSW01163287
66752
Alphaproteobacteria
CAG
Leu
>WENV170804431
MDSW01047458
113700
Alphaproteobacteria
>WENV170813224
MDSW01196246
238045
Alphaproteobacteria
TTC
Glu
>WENV170805217
MDSW01061194
257573
Alphaproteobacteria
GAA
Phe
>WENV170811772
MDSW01172589
257573
Alphaproteobacteria
GAA
Phe
>WENV170814783
MDSW01223064
257573
Alphaproteobacteria
GAA
Phe
>WENV170807512
MDSW01099930
184120
Alphaproteobacteria
GTG
His
>WENV170806552
MDSW01083575
176908
Alphaproteobacteria
GTC
Asp
>WENV170809453
MDSW01132425
176908
Alphaproteobacteria
GTC
Asp
>WENV170802838
MDSW01020162
199776
Alphaproteobacteria
CGG
Pro
>WENV170808667
MDSW01118996
282595
Alphaproteobacteria
CCA
Trp
>WENV170813530
MDSW01201538
31286
Alphaproteobacteria
GGA
Ser
>WENV170810856
MDSW01156192
435528
Alphaproteobacteria
GCA
Cys
>WENV170802823
MDSW01020078
239119
Alphaproteobacteria
CGT
Thr
>WENV170804455
MDSW01047788
239119
Alphaproteobacteria
CGT
Thr
>WENV170808202
MDSW01110938
148353
Alphaproteobacteria
CAT
Met
>WENV170810348
MDSW01147450
165266
Alphaproteobacteria
CAT
Met
>WENV170809613
MDSW01135422
256971
Alphaproteobacteria
TGT
Thr
>WENV170802686
MDSW01017921
190043
Alphaproteobacteria
CAT
Met
>WENV170803181
MDSW01026061
190043
Alphaproteobacteria
CAT
Met
>WENV170802749
MDSW01018924
338282
Alphaproteobacteria
GTT
Asn
>WENV170807333
MDSW01096889
338282
Alphaproteobacteria
GTT
Asn
>WENV170808374
MDSW01114033
338282
Alphaproteobacteria
GTT
Asn
>WENV170808891
MDSW01122733
338282
Alphaproteobacteria
GTT
Asn
>WENV170813640
MDSW01203901
338282
Alphaproteobacteria
GTT
Asn
>WENV170811811
MDSW01173129
147083
Alphaproteobacteria
GGG
Pro
>WENV170812506
MDSW01184564
239035
Alphaproteobacteria
CGC
Ala
>WENV170804284
MDSW01045063
200119
Alphaproteobacteria
CAT
Met
>WENV170814052
MDSW01210838
200119
Alphaproteobacteria
CAT
Met
>WENV170805947
MDSW01073858
339846
Alphaproteobacteria
GAC
Val
>WENV170811229
MDSW01163047
340288
Alphaproteobacteria
GCC
Gly
>WENV170809726
MDSW01137074
23560
Alphaproteobacteria
CGA
Ser
>WENV170811228
MDSW01163047
339290
Alphaproteobacteria
GGT
Thr
>WENV170802286
MDSW01010819
339454
Alphaproteobacteria
>WENV170812175
MDSW01179235
339454
Alphaproteobacteria
>WENV170814317
MDSW01214702
339722
Alphaproteobacteria
TTG
Gln
>WENV170807804
MDSW01104619
237740
Alphaproteobacteria
TTT
Lys
>WENV170813627
MDSW01203690
237740
Alphaproteobacteria
TTT
Lys
>WENV170808304
MDSW01112775
99414
Alphaproteobacteria
GTA
Tyr
>WENV170814594
MDSW01219744
338289
Alphaproteobacteria
GAC
Val
>WENV170803296
MDSW01027831
148265
Alphaproteobacteria
CCT
Arg
>WENV170804230
MDSW01043925
294226
Alphaproteobacteria
>WENV170806049
MDSW01075487
192195
Alphaproteobacteria
GTC
Asp
>WENV170807527
MDSW01100063
192195
Alphaproteobacteria
GTC
Asp
>WENV170807683
MDSW01102689
192195
Alphaproteobacteria
GTC
Asp
>WENV170812129
MDSW01178149
192195
Alphaproteobacteria
GTC
Asp
>WENV170813284
MDSW01197189
192195
Alphaproteobacteria
GTC
Asp
>WENV170802841
MDSW01020162
151730
Alphaproteobacteria
CCG
Arg
>WENV170807654
MDSW01102165
252148
Alphaproteobacteria
TGT
Thr
>WENV170814426
MDSW01216862
342876
Alphaproteobacteria
GAC
Val
>WENV170805185
MDSW01060562
167926
Alphaproteobacteria
CAT
Met
>WENV170808319
MDSW01112984
167926
Alphaproteobacteria
CAT
Met
>WENV170808286
MDSW01112471
161002
Alphaproteobacteria
GTG
His
>WENV170810693
MDSW01153494
161002
Alphaproteobacteria
GTG
His
>WENV170811847
MDSW01173814
161002
Alphaproteobacteria
GTG
His
>WENV170806821
MDSW01087763
148083
Alphaproteobacteria
ACG
Arg
>WENV170801713
MDSW01000958
289655
Alphaproteobacteria
GGC
Ala
>WENV170806365
MDSW01080769
59164
Alphaproteobacteria
GAG
Leu
>WENV170802019
MDSW01006142
147877
Alphaproteobacteria
GTG
His
>WENV170807028
MDSW01091527
359842
Alphaproteobacteria
GAC
Val
>WENV170810527
MDSW01150411
359842
Alphaproteobacteria
GAC
Val
>WENV170802077
MDSW01007076
284043
Alphaproteobacteria
CGT
Thr
>WENV170803746
MDSW01034895
348781
Alphaproteobacteria
GAA
Phe
>WENV170804667
MDSW01051405
348781
Alphaproteobacteria
GAA
Phe
>WENV170805457
MDSW01065152
348781
Alphaproteobacteria
GAA
Phe
>WENV170806984
MDSW01090796
412477
Alphaproteobacteria
GCA
Cys
>WENV170811848
MDSW01173814
339883
Alphaproteobacteria
TTG
Gln
>WENV170802839
MDSW01020162
352191
Alphaproteobacteria
GGT
Thr
>WENV170804038
MDSW01040344
266073
Alphaproteobacteria
TTT
Lys
>WENV170807685
MDSW01102718
266073
Alphaproteobacteria
TTT
Lys
>WENV170809627
MDSW01135723
266073
Alphaproteobacteria
TTT
Lys
>WENV170812850
MDSW01190244
266073
Alphaproteobacteria
TTT
Lys
>WENV170813886
MDSW01207986
266073
Alphaproteobacteria
TTT
Lys
>WENV170812552
MDSW01185601
268365
Alphaproteobacteria
CCA
Trp
>WENV170802986
MDSW01022925
177001
Alphaproteobacteria
TCT
Arg
>WENV170803358
MDSW01028835
339639
Alphaproteobacteria
TTG
Gln
>WENV170810778
MDSW01154869
427621
Alphaproteobacteria
TCC
Gly
>WENV170802945
MDSW01022134
339609
Alphaproteobacteria
GGT
Thr
>WENV170802181
MDSW01009177
29831
Alphaproteobacteria
TGA
Ser
>WENV170808751
MDSW01120580
412424
Alphaproteobacteria
TCC
Gly
>WENV170812058
MDSW01176858
412424
Alphaproteobacteria
TCC
Gly
>WENV170813393
MDSW01199398
412424
Alphaproteobacteria
TCC
Gly
>WENV170806133
MDSW01077263
113715
Alphaproteobacteria
TAG
Leu
>WENV170803376
MDSW01029203
150356
Alphaproteobacteria
GTC
Asp
>WENV170806643
MDSW01084970
150356
Alphaproteobacteria
GTC
Asp
>WENV170807833
MDSW01105091
150356
Alphaproteobacteria
GTC
Asp
>WENV170809034
MDSW01125092
150356
Alphaproteobacteria
GTC
Asp
>WENV170813487
MDSW01200897
174372
Alphaproteobacteria
CAT
Met
>WENV170810288
MDSW01146358
236256
Alphaproteobacteria
TAC
Val
>WENV170809318
MDSW01129861
294405
Alphaproteobacteria
CCA
Trp
>WENV170806866
MDSW01088464
113767
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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