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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
151 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170867862
MDTB01152659
364406
Alphaproteobacteria
GCC
Gly
>WENV170858415
MDTB01022252
165250
Alphaproteobacteria
TGG
Pro
>WENV170865934
MDTB01126419
165250
Alphaproteobacteria
TGG
Pro
>WENV170869320
MDTB01174346
165250
Alphaproteobacteria
TGG
Pro
>WENV170874213
MDTB01243362
339360
Alphaproteobacteria
>WENV170867080
MDTB01141440
339737
Alphaproteobacteria
GAC
Val
>WENV170861924
MDTB01070995
30581
Alphaproteobacteria
GGA
Ser
>WENV170862689
MDTB01080875
30581
Alphaproteobacteria
GGA
Ser
>WENV170862991
MDTB01084898
34696
Alphaproteobacteria
GGA
Ser
>WENV170868694
MDTB01165668
59361
Alphaproteobacteria
GAG
Leu
>WENV170869725
MDTB01180919
306070
Alphaproteobacteria
CCA
Trp
>WENV170871629
MDTB01208338
306070
Alphaproteobacteria
CCA
Trp
>WENV170871935
MDTB01212265
306070
Alphaproteobacteria
CCA
Trp
>WENV170873116
MDTB01227931
306070
Alphaproteobacteria
CCA
Trp
>WENV170859714
MDTB01040226
306070
Alphaproteobacteria
CCA
Trp
>WENV170860434
MDTB01050894
306070
Alphaproteobacteria
CCA
Trp
>WENV170860529
MDTB01052378
306070
Alphaproteobacteria
CCA
Trp
>WENV170861025
MDTB01058739
306070
Alphaproteobacteria
CCA
Trp
>WENV170865989
MDTB01127088
306070
Alphaproteobacteria
CCA
Trp
>WENV170867128
MDTB01142116
306070
Alphaproteobacteria
CCA
Trp
>WENV170867912
MDTB01153456
306070
Alphaproteobacteria
CCA
Trp
>WENV170856784
MDTB01000302
237489
Alphaproteobacteria
CAT
Met
>WENV170867941
MDTB01154037
162089
Alphaproteobacteria
TGG
Pro
>WENV170858603
MDTB01024868
144964
Alphaproteobacteria
TGG
Pro
>WENV170860078
MDTB01045715
109657
Alphaproteobacteria
TAG
Leu
>WENV170861459
MDTB01064719
109657
Alphaproteobacteria
TAG
Leu
>WENV170868974
MDTB01169854
257573
Alphaproteobacteria
GAA
Phe
>WENV170872539
MDTB01219343
257573
Alphaproteobacteria
GAA
Phe
>WENV170873152
MDTB01228442
257573
Alphaproteobacteria
GAA
Phe
>WENV170873491
MDTB01233015
257573
Alphaproteobacteria
GAA
Phe
>WENV170861085
MDTB01059529
257573
Alphaproteobacteria
GAA
Phe
>WENV170861703
MDTB01068186
257573
Alphaproteobacteria
GAA
Phe
>WENV170867288
MDTB01144575
146875
Alphaproteobacteria
GTG
His
>WENV170869435
MDTB01175982
184120
Alphaproteobacteria
GTG
His
>WENV170870923
MDTB01199340
184120
Alphaproteobacteria
GTG
His
>WENV170872123
MDTB01214527
184120
Alphaproteobacteria
GTG
His
>WENV170872260
MDTB01216156
184120
Alphaproteobacteria
GTG
His
>WENV170868598
MDTB01164105
176908
Alphaproteobacteria
GTC
Asp
>WENV170871370
MDTB01204769
176908
Alphaproteobacteria
GTC
Asp
>WENV170871422
MDTB01205421
176908
Alphaproteobacteria
GTC
Asp
>WENV170862357
MDTB01076581
176908
Alphaproteobacteria
GTC
Asp
>WENV170867172
MDTB01142779
176908
Alphaproteobacteria
GTC
Asp
>WENV170861449
MDTB01064597
199776
Alphaproteobacteria
CGG
Pro
>WENV170873476
MDTB01232809
435528
Alphaproteobacteria
GCA
Cys
>WENV170861534
MDTB01065794
421153
Alphaproteobacteria
>WENV170865010
MDTB01113495
148353
Alphaproteobacteria
CAT
Met
>WENV170868952
MDTB01169622
23561
Alphaproteobacteria
GGA
Ser
>WENV170868306
MDTB01159598
338282
Alphaproteobacteria
GTT
Asn
>WENV170870568
MDTB01193720
338282
Alphaproteobacteria
GTT
Asn
>WENV170871630
MDTB01208340
338282
Alphaproteobacteria
GTT
Asn
>WENV170859588
MDTB01038281
31506
Alphaproteobacteria
TGA
Ser
>WENV170861470
MDTB01064914
200119
Alphaproteobacteria
CAT
Met
>WENV170862307
MDTB01076028
200119
Alphaproteobacteria
CAT
Met
>WENV170857728
MDTB01012554
340288
Alphaproteobacteria
GCC
Gly
>WENV170868495
MDTB01162651
339722
Alphaproteobacteria
TTG
Gln
>WENV170859059
MDTB01031080
249928
Alphaproteobacteria
TAC
Val
>WENV170864775
MDTB01110409
249928
Alphaproteobacteria
TAC
Val
>WENV170861950
MDTB01071230
74116
Alphaproteobacteria
CAG
Leu
>WENV170871303
MDTB01203926
294226
Alphaproteobacteria
>WENV170872612
MDTB01220359
194755
Alphaproteobacteria
CAT
Met
>WENV170859004
MDTB01030277
194755
Alphaproteobacteria
CAT
Met
>WENV170863173
MDTB01087856
194755
Alphaproteobacteria
CAT
Met
>WENV170870990
MDTB01200147
151733
Alphaproteobacteria
GGG
Pro
>WENV170868114
MDTB01156874
28682
Alphaproteobacteria
GGA
Ser
>WENV170863356
MDTB01090168
339725
Alphaproteobacteria
GAA
Phe
>WENV170872033
MDTB01213370
192195
Alphaproteobacteria
GTC
Asp
>WENV170872501
MDTB01218883
192195
Alphaproteobacteria
GTC
Asp
>WENV170860532
MDTB01052446
192195
Alphaproteobacteria
GTC
Asp
>WENV170861894
MDTB01070592
192195
Alphaproteobacteria
GTC
Asp
>WENV170863996
MDTB01099274
192195
Alphaproteobacteria
GTC
Asp
>WENV170866753
MDTB01137269
192195
Alphaproteobacteria
GTC
Asp
>WENV170866847
MDTB01137907
192195
Alphaproteobacteria
GTC
Asp
>WENV170867853
MDTB01152559
258175
Alphaproteobacteria
CGC
Ala
>WENV170869541
MDTB01177886
252148
Alphaproteobacteria
TGT
Thr
>WENV170865975
MDTB01126811
252148
Alphaproteobacteria
TGT
Thr
>WENV170870124
MDTB01187260
340106
Alphaproteobacteria
GCC
Gly
>WENV170856809
MDTB01000551
167926
Alphaproteobacteria
CAT
Met
>WENV170864685
MDTB01108948
167926
Alphaproteobacteria
CAT
Met
>WENV170867289
MDTB01144575
167926
Alphaproteobacteria
CAT
Met
>WENV170859197
MDTB01032747
161002
Alphaproteobacteria
GTG
His
>WENV170871767
MDTB01210152
254522
Alphaproteobacteria
GAA
Phe
>WENV170862866
MDTB01083179
254522
Alphaproteobacteria
GAA
Phe
>WENV170864251
MDTB01102577
254522
Alphaproteobacteria
GAA
Phe
>WENV170857536
MDTB01010283
289655
Alphaproteobacteria
GGC
Ala
>WENV170869240
MDTB01173140
59164
Alphaproteobacteria
GAG
Leu
>WENV170873348
MDTB01230970
59164
Alphaproteobacteria
GAG
Leu
>WENV170865589
MDTB01121304
59164
Alphaproteobacteria
GAG
Leu
>WENV170861581
MDTB01066492
280207
Alphaproteobacteria
TGC
Ala
>WENV170870867
MDTB01198730
348781
Alphaproteobacteria
GAA
Phe
>WENV170871348
MDTB01204473
348781
Alphaproteobacteria
GAA
Phe
>WENV170873228
MDTB01229219
348781
Alphaproteobacteria
GAA
Phe
>WENV170873278
MDTB01230033
348781
Alphaproteobacteria
GAA
Phe
>WENV170864873
MDTB01111572
163860
Alphaproteobacteria
GGG
Pro
>WENV170867011
MDTB01140477
163860
Alphaproteobacteria
GGG
Pro
>WENV170867730
MDTB01150680
412477
Alphaproteobacteria
GCA
Cys
>WENV170868759
MDTB01166703
241518
Alphaproteobacteria
CCA
Trp
>WENV170870722
MDTB01196409
241518
Alphaproteobacteria
CCA
Trp
>WENV170872549
MDTB01219531
241518
Alphaproteobacteria
CCA
Trp
>WENV170873253
MDTB01229575
241518
Alphaproteobacteria
CCA
Trp
>WENV170857580
MDTB01010892
241518
Alphaproteobacteria
CCA
Trp
>WENV170860246
MDTB01048270
241518
Alphaproteobacteria
CCA
Trp
>WENV170861226
MDTB01061248
241518
Alphaproteobacteria
CCA
Trp
>WENV170862468
MDTB01078102
241518
Alphaproteobacteria
CCA
Trp
>WENV170867952
MDTB01154226
241518
Alphaproteobacteria
CCA
Trp
>WENV170869988
MDTB01184692
279830
Alphaproteobacteria
TAC
Val
>WENV170864944
MDTB01112547
187569
Alphaproteobacteria
CCG
Arg
>WENV170871504
MDTB01206410
319925
Alphaproteobacteria
TGT
Thr
>WENV170872009
MDTB01213219
319925
Alphaproteobacteria
TGT
Thr
>WENV170872094
MDTB01214099
319925
Alphaproteobacteria
TGT
Thr
>WENV170857879
MDTB01014685
319925
Alphaproteobacteria
TGT
Thr
>WENV170858583
MDTB01024701
319925
Alphaproteobacteria
TGT
Thr
>WENV170858752
MDTB01026696
319925
Alphaproteobacteria
TGT
Thr
>WENV170864955
MDTB01112654
319925
Alphaproteobacteria
TGT
Thr
>WENV170865958
MDTB01126645
319925
Alphaproteobacteria
TGT
Thr
>WENV170868992
MDTB01170174
266073
Alphaproteobacteria
TTT
Lys
>WENV170869831
MDTB01182921
266073
Alphaproteobacteria
TTT
Lys
>WENV170871581
MDTB01207557
266073
Alphaproteobacteria
TTT
Lys
>WENV170873876
MDTB01238447
266073
Alphaproteobacteria
TTT
Lys
>WENV170874198
MDTB01243079
266073
Alphaproteobacteria
TTT
Lys
>WENV170860500
MDTB01051810
266073
Alphaproteobacteria
TTT
Lys
>WENV170862173
MDTB01074202
266073
Alphaproteobacteria
TTT
Lys
>WENV170862889
MDTB01083592
266073
Alphaproteobacteria
TTT
Lys
>WENV170863431
MDTB01091098
266073
Alphaproteobacteria
TTT
Lys
>WENV170864029
MDTB01099661
266073
Alphaproteobacteria
TTT
Lys
>WENV170865350
MDTB01118331
266073
Alphaproteobacteria
TTT
Lys
>WENV170869322
MDTB01174364
369678
Alphaproteobacteria
GGT
Thr
>WENV170871588
MDTB01207672
369678
Alphaproteobacteria
GGT
Thr
>WENV170861533
MDTB01065794
369678
Alphaproteobacteria
GGT
Thr
>WENV170863687
MDTB01094600
369678
Alphaproteobacteria
GGT
Thr
>WENV170867991
MDTB01154941
369678
Alphaproteobacteria
GGT
Thr
>WENV170863005
MDTB01085141
235430
Alphaproteobacteria
TTT
Lys
>WENV170867803
MDTB01151887
235430
Alphaproteobacteria
TTT
Lys
>WENV170859182
MDTB01032577
339606
Alphaproteobacteria
>WENV170872313
MDTB01216782
412424
Alphaproteobacteria
TCC
Gly
>WENV170857919
MDTB01015384
412424
Alphaproteobacteria
TCC
Gly
>WENV170863527
MDTB01092260
412424
Alphaproteobacteria
TCC
Gly
>WENV170866393
MDTB01132501
412424
Alphaproteobacteria
TCC
Gly
>WENV170869066
MDTB01171229
150356
Alphaproteobacteria
GTC
Asp
>WENV170873304
MDTB01230406
150356
Alphaproteobacteria
GTC
Asp
>WENV170862722
MDTB01081121
150356
Alphaproteobacteria
GTC
Asp
>WENV170864273
MDTB01102823
150356
Alphaproteobacteria
GTC
Asp
>WENV170865015
MDTB01113546
21074
Alphaproteobacteria
GGA
Ser
>WENV170873789
MDTB01237406
268598
Alphaproteobacteria
GAA
Phe
>WENV170859339
MDTB01034775
268598
Alphaproteobacteria
GAA
Phe
>WENV170872600
MDTB01220182
180581
Alphaproteobacteria
TGG
Pro
>WENV170859871
MDTB01042730
377327
Alphaproteobacteria
GCC
Gly
>WENV170863642
MDTB01094047
185506
Alphaproteobacteria
CAT
Met
>WENV170858175
MDTB01018591
10904
Alphaproteobacteria
GCT
Ser
>WENV170867907
MDTB01153379
191695
Alphaproteobacteria
CCT
Arg
>WENV170873313
MDTB01230512
193837
Alphaproteobacteria
CAT
Met
>WENV170869991
MDTB01184752
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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