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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
188 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170870250
MDTB01188958
146662
Gammaproteobacteria
GAC
Val
>WENV170859951
MDTB01044125
183605
Gammaproteobacteria
CCG
Arg
>WENV170860101
MDTB01046227
312287
Gammaproteobacteria
TGT
Thr
>WENV170871959
MDTB01212476
312287
Gammaproteobacteria
TGT
Thr
>WENV170863141
MDTB01087521
20025
Gammaproteobacteria
GGA
Ser
>WENV170866357
MDTB01131901
95975
Gammaproteobacteria
GAG
Leu
>WENV170867167
MDTB01142744
95975
Gammaproteobacteria
GAG
Leu
>WENV170870434
MDTB01191817
95975
Gammaproteobacteria
GAG
Leu
>WENV170872681
MDTB01221404
313881
Gammaproteobacteria
GGC
Ala
>WENV170858505
MDTB01023779
147048
Gammaproteobacteria
CCA
Trp
>WENV170867417
MDTB01146404
147048
Gammaproteobacteria
CCA
Trp
>WENV170865625
MDTB01121941
163492
Gammaproteobacteria
TGG
Pro
>WENV170863222
MDTB01088659
279385
Gammaproteobacteria
TTT
Lys
>WENV170863223
MDTB01088659
279385
Gammaproteobacteria
TTT
Lys
>WENV170863842
MDTB01097027
236480
Gammaproteobacteria
GTG
His
>WENV170866137
MDTB01128921
238438
Gammaproteobacteria
>WENV170857416
MDTB01008525
283668
Gammaproteobacteria
TTT
Lys
>WENV170859689
MDTB01039707
249887
Gammaproteobacteria
GGT
Thr
>WENV170859798
MDTB01041596
61925
Gammaproteobacteria
TAA
Leu
>WENV170863374
MDTB01090302
21234
Gammaproteobacteria
TGA
Ser
>WENV170871035
MDTB01200679
147053
Gammaproteobacteria
GTT
Asn
>WENV170871857
MDTB01211217
147053
Gammaproteobacteria
GTT
Asn
>WENV170860033
MDTB01045142
147053
Gammaproteobacteria
GTT
Asn
>WENV170863034
MDTB01085527
241476
Gammaproteobacteria
TTT
Lys
>WENV170868293
MDTB01159345
108171
Gammaproteobacteria
GTA
Tyr
>WENV170860175
MDTB01047197
46594
Gammaproteobacteria
GGA
Ser
>WENV170860893
MDTB01056998
46594
Gammaproteobacteria
GGA
Ser
>WENV170866210
MDTB01129846
46594
Gammaproteobacteria
GGA
Ser
>WENV170871336
MDTB01204186
269248
Gammaproteobacteria
CCA
Trp
>WENV170860960
MDTB01057859
269248
Gammaproteobacteria
CCA
Trp
>WENV170863896
MDTB01097943
269248
Gammaproteobacteria
CCA
Trp
>WENV170871354
MDTB01204518
147647
Gammaproteobacteria
CAT
Met
>WENV170858786
MDTB01027224
147647
Gammaproteobacteria
CAT
Met
>WENV170859093
MDTB01031433
185163
Gammaproteobacteria
ACG
Arg
>WENV170859094
MDTB01031433
185163
Gammaproteobacteria
ACG
Arg
>WENV170865116
MDTB01114909
185163
Gammaproteobacteria
ACG
Arg
>WENV170858469
MDTB01023127
181949
Gammaproteobacteria
CAT
Met
>WENV170868940
MDTB01169451
237709
Gammaproteobacteria
GTG
His
>WENV170869127
MDTB01171837
237709
Gammaproteobacteria
GTG
His
>WENV170866828
MDTB01137791
237709
Gammaproteobacteria
GTG
His
>WENV170859344
MDTB01034842
198730
Gammaproteobacteria
GAC
Val
>WENV170859204
MDTB01032776
154268
Gammaproteobacteria
ACG
Arg
>WENV170860401
MDTB01050563
240642
Gammaproteobacteria
GTT
Asn
>WENV170861234
MDTB01061377
240642
Gammaproteobacteria
GTT
Asn
>WENV170869239
MDTB01173133
149036
Gammaproteobacteria
CCA
Trp
>WENV170870631
MDTB01194719
149036
Gammaproteobacteria
CCA
Trp
>WENV170857206
MDTB01005794
149036
Gammaproteobacteria
CCA
Trp
>WENV170870318
MDTB01190064
245602
Gammaproteobacteria
TTT
Lys
>WENV170873917
MDTB01238997
245602
Gammaproteobacteria
TTT
Lys
>WENV170857078
MDTB01003926
245602
Gammaproteobacteria
TTT
Lys
>WENV170857570
MDTB01010829
245602
Gammaproteobacteria
TTT
Lys
>WENV170861775
MDTB01069098
245602
Gammaproteobacteria
TTT
Lys
>WENV170864024
MDTB01099547
245602
Gammaproteobacteria
TTT
Lys
>WENV170867427
MDTB01146577
146791
Gammaproteobacteria
GAC
Val
>WENV170871335
MDTB01204186
322642
Gammaproteobacteria
GGT
Thr
>WENV170873078
MDTB01227385
322642
Gammaproteobacteria
GGT
Thr
>WENV170856907
MDTB01001682
322642
Gammaproteobacteria
GGT
Thr
>WENV170858509
MDTB01023836
322642
Gammaproteobacteria
GGT
Thr
>WENV170858656
MDTB01025584
322642
Gammaproteobacteria
GGT
Thr
>WENV170861468
MDTB01064847
322642
Gammaproteobacteria
GGT
Thr
>WENV170862052
MDTB01072583
322642
Gammaproteobacteria
GGT
Thr
>WENV170872915
MDTB01225091
148148
Gammaproteobacteria
GAC
Val
>WENV170857151
MDTB01004955
148148
Gammaproteobacteria
GAC
Val
>WENV170858809
MDTB01027459
148148
Gammaproteobacteria
GAC
Val
>WENV170863867
MDTB01097523
148148
Gammaproteobacteria
GAC
Val
>WENV170864461
MDTB01105605
148148
Gammaproteobacteria
GAC
Val
>WENV170867411
MDTB01146347
148148
Gammaproteobacteria
GAC
Val
>WENV170870750
MDTB01196776
145261
Gammaproteobacteria
CAT
Met
>WENV170857157
MDTB01005002
69672
Gammaproteobacteria
TAA
Leu
>WENV170863250
MDTB01088925
69672
Gammaproteobacteria
TAA
Leu
>WENV170866123
MDTB01128777
69672
Gammaproteobacteria
TAA
Leu
>WENV170867802
MDTB01151886
69672
Gammaproteobacteria
TAA
Leu
>WENV170868031
MDTB01155448
69672
Gammaproteobacteria
TAA
Leu
>WENV170869101
MDTB01171615
270709
Gammaproteobacteria
GTG
His
>WENV170858054
MDTB01017244
270709
Gammaproteobacteria
GTG
His
>WENV170874071
MDTB01241247
301232
Gammaproteobacteria
TTC
Glu
>WENV170872246
MDTB01216052
412799
Gammaproteobacteria
GCA
Cys
>WENV170870144
MDTB01187504
164116
Gammaproteobacteria
TCT
Arg
>WENV170865957
MDTB01126631
340801
Gammaproteobacteria
CCT
Arg
>WENV170872015
MDTB01213243
426403
Gammaproteobacteria
GCA
Cys
>WENV170867398
MDTB01146209
426403
Gammaproteobacteria
GCA
Cys
>WENV170872483
MDTB01218582
52727
Gammaproteobacteria
GGA
Ser
>WENV170866010
MDTB01127368
377319
Gammaproteobacteria
TTG
Gln
>WENV170873654
MDTB01235863
202944
Gammaproteobacteria
TGG
Pro
>WENV170858426
MDTB01022324
202944
Gammaproteobacteria
TGG
Pro
>WENV170862827
MDTB01082785
202944
Gammaproteobacteria
TGG
Pro
>WENV170867182
MDTB01142944
202944
Gammaproteobacteria
TGG
Pro
>WENV170868687
MDTB01165562
199268
Gammaproteobacteria
ACG
Arg
>WENV170873835
MDTB01237957
199268
Gammaproteobacteria
ACG
Arg
>WENV170857563
MDTB01010821
199268
Gammaproteobacteria
ACG
Arg
>WENV170865099
MDTB01114803
199268
Gammaproteobacteria
ACG
Arg
>WENV170868157
MDTB01157670
152450
Gammaproteobacteria
GAC
Val
>WENV170858892
MDTB01028688
6972
Gammaproteobacteria
>WENV170862805
MDTB01082453
6972
Gammaproteobacteria
>WENV170857844
MDTB01014167
252289
Gammaproteobacteria
TTT
Lys
>WENV170859525
MDTB01037365
252289
Gammaproteobacteria
TTT
Lys
>WENV170862391
MDTB01077136
252289
Gammaproteobacteria
TTT
Lys
>WENV170867641
MDTB01149091
252289
Gammaproteobacteria
TTT
Lys
>WENV170873419
MDTB01231937
411766
Gammaproteobacteria
GCA
Cys
>WENV170859233
MDTB01033142
411766
Gammaproteobacteria
GCA
Cys
>WENV170860140
MDTB01046637
411766
Gammaproteobacteria
GCA
Cys
>WENV170861803
MDTB01069332
147057
Gammaproteobacteria
GAC
Val
>WENV170868557
MDTB01163745
294663
Gammaproteobacteria
TTC
Glu
>WENV170857084
MDTB01004071
294663
Gammaproteobacteria
TTC
Glu
>WENV170857712
MDTB01012355
294663
Gammaproteobacteria
TTC
Glu
>WENV170863993
MDTB01099246
294663
Gammaproteobacteria
TTC
Glu
>WENV170870143
MDTB01187504
147055
Gammaproteobacteria
TGG
Pro
>WENV170862051
MDTB01072583
412476
Gammaproteobacteria
TCC
Gly
>WENV170871334
MDTB01204186
412476
Gammaproteobacteria
TCC
Gly
>WENV170873077
MDTB01227385
412476
Gammaproteobacteria
TCC
Gly
>WENV170862979
MDTB01084798
319098
Gammaproteobacteria
TAC
Val
>WENV170863494
MDTB01091777
319098
Gammaproteobacteria
TAC
Val
>WENV170867828
MDTB01152201
319098
Gammaproteobacteria
TAC
Val
>WENV170867830
MDTB01152201
319098
Gammaproteobacteria
TAC
Val
>WENV170865115
MDTB01114909
10767
Gammaproteobacteria
GCT
Ser
>WENV170864388
MDTB01104700
173040
Gammaproteobacteria
GAC
Val
>WENV170864616
MDTB01108063
173040
Gammaproteobacteria
GAC
Val
>WENV170865480
MDTB01119793
173040
Gammaproteobacteria
GAC
Val
>WENV170868113
MDTB01156850
173040
Gammaproteobacteria
GAC
Val
>WENV170872607
MDTB01220283
173040
Gammaproteobacteria
GAC
Val
>WENV170865498
MDTB01120102
108266
Gammaproteobacteria
GTA
Tyr
>WENV170870467
MDTB01192344
147051
Gammaproteobacteria
CAT
Met
>WENV170863114
MDTB01086868
147051
Gammaproteobacteria
CAT
Met
>WENV170859006
MDTB01030285
165387
Gammaproteobacteria
CCT
Arg
>WENV170861655
MDTB01067523
165387
Gammaproteobacteria
CCT
Arg
>WENV170864742
MDTB01109815
165387
Gammaproteobacteria
CCT
Arg
>WENV170860410
MDTB01050628
311863
Gammaproteobacteria
GGC
Ala
>WENV170862854
MDTB01083058
311863
Gammaproteobacteria
GGC
Ala
>WENV170872247
MDTB01216052
77137
Gammaproteobacteria
TAA
Leu
>WENV170859634
MDTB01038907
145713
Gammaproteobacteria
CAT
Met
>WENV170860391
MDTB01050430
145713
Gammaproteobacteria
CAT
Met
>WENV170863406
MDTB01090798
145713
Gammaproteobacteria
CAT
Met
>WENV170873270
MDTB01229856
411842
Gammaproteobacteria
GCA
Cys
>WENV170863364
MDTB01090225
16396
Gammaproteobacteria
TGA
Ser
>WENV170871747
MDTB01209888
27873
Gammaproteobacteria
TGA
Ser
>WENV170867985
MDTB01154817
412373
Gammaproteobacteria
GCA
Cys
>WENV170873236
MDTB01229341
237712
Gammaproteobacteria
TGT
Thr
>WENV170859521
MDTB01037294
237712
Gammaproteobacteria
TGT
Thr
>WENV170863140
MDTB01087502
237712
Gammaproteobacteria
TGT
Thr
>WENV170857819
MDTB01013729
154796
Gammaproteobacteria
TCT
Arg
>WENV170857453
MDTB01009056
195303
Gammaproteobacteria
GAT
Ile
>WENV170859542
MDTB01037567
195303
Gammaproteobacteria
GAT
Ile
>WENV170864665
MDTB01108802
195303
Gammaproteobacteria
GAT
Ile
>WENV170859186
MDTB01032604
339597
Gammaproteobacteria
CCG
Arg
>WENV170866777
MDTB01137451
145491
Gammaproteobacteria
GGG
Pro
>WENV170861374
MDTB01063435
128930
Gammaproteobacteria
GTC
Asp
>WENV170860448
MDTB01051103
146807
Gammaproteobacteria
TCT
Arg
>WENV170871332
MDTB01204168
59658
Gammaproteobacteria
CAA
Leu
>WENV170857393
MDTB01008309
59658
Gammaproteobacteria
CAA
Leu
>WENV170863308
MDTB01089647
59658
Gammaproteobacteria
CAA
Leu
>WENV170873075
MDTB01227385
237421
Gammaproteobacteria
TGT
Thr
>WENV170858082
MDTB01017509
237421
Gammaproteobacteria
TGT
Thr
>WENV170858117
MDTB01017875
237421
Gammaproteobacteria
TGT
Thr
>WENV170862049
MDTB01072583
237421
Gammaproteobacteria
TGT
Thr
>WENV170864012
MDTB01099360
237421
Gammaproteobacteria
TGT
Thr
>WENV170873396
MDTB01231627
163882
Gammaproteobacteria
GAC
Val
>WENV170858211
MDTB01019135
203054
Gammaproteobacteria
ACG
Arg
>WENV170863313
MDTB01089693
343529
Gammaproteobacteria
CCG
Arg
>WENV170856912
MDTB01001794
179790
Gammaproteobacteria
CAT
Met
>WENV170864989
MDTB01113111
179790
Gammaproteobacteria
CAT
Met
>WENV170871750
MDTB01209888
245151
Gammaproteobacteria
GTG
His
>WENV170861033
MDTB01058814
411735
Gammaproteobacteria
GCA
Cys
>WENV170863231
MDTB01088731
411735
Gammaproteobacteria
GCA
Cys
>WENV170866757
MDTB01137310
411735
Gammaproteobacteria
GCA
Cys
>WENV170869668
MDTB01180108
16460
Gammaproteobacteria
TGA
Ser
>WENV170858310
MDTB01020781
16460
Gammaproteobacteria
TGA
Ser
>WENV170858891
MDTB01028688
16460
Gammaproteobacteria
TGA
Ser
>WENV170860731
MDTB01054951
16460
Gammaproteobacteria
TGA
Ser
>WENV170868074
MDTB01156275
96080
Gammaproteobacteria
CAA
Leu
>WENV170868081
MDTB01156431
96080
Gammaproteobacteria
CAA
Leu
>WENV170870762
MDTB01196975
198797
Gammaproteobacteria
TGG
Pro
>WENV170872789
MDTB01222995
198797
Gammaproteobacteria
TGG
Pro
>WENV170859372
MDTB01035253
198797
Gammaproteobacteria
TGG
Pro
>WENV170859987
MDTB01044510
198797
Gammaproteobacteria
TGG
Pro
>WENV170862486
MDTB01078291
198797
Gammaproteobacteria
TGG
Pro
>WENV170863460
MDTB01091486
198797
Gammaproteobacteria
TGG
Pro
>WENV170859638
MDTB01038963
17756
Gammaproteobacteria
TGA
Ser
>WENV170859459
MDTB01036577
150648
Gammaproteobacteria
TGG
Pro
>WENV170861578
MDTB01066476
241212
Gammaproteobacteria
GTG
His
>WENV170861404
MDTB01063906
147049
Gammaproteobacteria
GGG
Pro
>WENV170873269
MDTB01229856
270352
Gammaproteobacteria
GCC
Gly
>WENV170869555
MDTB01178065
190809
Gammaproteobacteria
GGG
Pro
>WENV170856976
MDTB01002609
190809
Gammaproteobacteria
GGG
Pro
>WENV170858500
MDTB01023724
190809
Gammaproteobacteria
GGG
Pro
>WENV170870210
MDTB01188401
243899
Gammaproteobacteria
TTT
Lys
>WENV170869525
MDTB01177438
237711
Gammaproteobacteria
GAA
Phe
>WENV170872771
MDTB01222683
237711
Gammaproteobacteria
GAA
Phe
>WENV170863139
MDTB01087502
237711
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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