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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170888573
MDTC01260022
95988
Actinomycetota
TAG
Leu
>WENV170874873
MDTC01012681
80875
Actinomycetota
GTA
Tyr
>WENV170877597
MDTC01060933
240825
Actinomycetota
GTG
His
>WENV170888662
MDTC01261703
413688
Actinomycetota
CCC
Gly
>WENV170879449
MDTC01095426
411680
Actinomycetota
TCC
Gly
>WENV170880433
MDTC01113398
45926
Actinomycetota
TGA
Ser
>WENV170888656
MDTC01261539
417087
Actinomycetota
CCC
Gly
>WENV170888244
MDTC01254150
95968
Actinomycetota
TAG
Leu
>WENV170888106
MDTC01251259
243603
Actinomycetota
ACG
Arg
>WENV170888105
MDTC01251259
10557
Actinomycetota
GCT
Ser
>WENV170881362
MDTC01129746
259567
Actinomycetota
CTT
Lys
>WENV170876692
MDTC01044904
266917
Actinomycetota
GTG
His
>WENV170887687
MDTC01243955
277211
Actinomycetota
TTC
Glu
>WENV170885793
MDTC01209090
16376
Actinomycetota
CGA
Ser
>WENV170874672
MDTC01009124
240687
Actinomycetota
>WENV170880240
MDTC01109249
240687
Actinomycetota
>WENV170875629
MDTC01025447
270259
Actinomycetota
TTC
Glu
>WENV170875259
MDTC01018562
236214
Actinomycetota
CCA
Trp
>WENV170880946
MDTC01122832
236214
Actinomycetota
CCA
Trp
>WENV170885770
MDTC01208660
236214
Actinomycetota
CCA
Trp
>WENV170888276
MDTC01254878
236214
Actinomycetota
CCA
Trp
>WENV170884600
MDTC01186062
254605
Actinomycetota
TAA
Leu
>WENV170880947
MDTC01122852
237513
Actinomycetota
ACG
Arg
>WENV170880434
MDTC01113398
11546
Actinomycetota
GCT
Ser
>WENV170886304
MDTC01218923
235231
Actinomycetota
>WENV170876893
MDTC01048340
237593
Actinomycetota
GTT
Asn
>WENV170883823
MDTC01173212
243463
Actinomycetota
GCC
Gly
>WENV170875538
MDTC01023457
342999
Actinomycetota
GGT
Thr
>WENV170887669
MDTC01243766
179547
Actinomycetota
GGG
Pro
>WENV170877716
MDTC01063222
338185
Actinomycetota
TGT
Thr
>WENV170879868
MDTC01102144
268346
Actinomycetota
GGC
Ala
>WENV170880429
MDTC01113262
268346
Actinomycetota
GGC
Ala
>WENV170875539
MDTC01023457
146888
Actinomycetota
CAT
Met
>WENV170878541
MDTC01078668
145165
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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